GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:TIPIN

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) TIPIN
Protein Name(s) TIMELESS-interacting protein
External Links
UniProt Q5F416
EMBL AJ851484
RefSeq NP_001012708.1
UniGene Gga.44705
STRING 9031.ENSGALP00000012365
GeneID 415548
KEGG gga:415548
CTD 54962
eggNOG NOG323610
HOGENOM HOG000154594
HOVERGEN HBG061130
InParanoid Q5F416
KO K10904
PhylomeDB Q5F416
NextBio 20819131
PRO PR:Q5F416
Proteomes UP000000539
GO GO:0005737
GO:0000790
GO:0005634
GO:0044770
GO:0000076
GO:0031573
GO:0007067
GO:0008284
GO:0048478
InterPro IPR012923
Pfam PF07962
ProDom PD089639

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0044770

cell cycle phase transition

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

involved_in

GO:0031573

intra-S DNA damage checkpoint

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

C

Seeded From UniProt

complete

involved_in

GO:0000076

DNA replication checkpoint

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

involved_in

GO:0048478

replication fork protection

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
PomBase:SPBC30D10.04
SGD:S000004651

P

Seeded From UniProt

complete

involved_in

GO:0043111

replication fork arrest

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
SGD:S000004651

P

Seeded From UniProt

complete

part_of

GO:0031298

replication fork protection complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
SGD:S000004651

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
PomBase:SPBC30D10.04

F

Seeded From UniProt

complete

involved_in

GO:0000076

DNA replication checkpoint

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

involved_in

GO:0000076

DNA replication checkpoint

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR040038

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

P

Seeded From UniProt

complete

involved_in

GO:0048478

replication fork protection

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

P

Seeded From UniProt

complete

involved_in

GO:0051301

cell division

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0132

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page