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CHICK:TCP4

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SUB1 (synonyms: RPO2TC1)
Protein Name(s) Activated RNA polymerase II transcriptional coactivator p15

SUB1 homolog

External Links
UniProt Q5ZK63
EMBL AJ720221
RefSeq NP_001008479.1
UniGene Gga.11479
ProteinModelPortal Q5ZK63
SMR Q5ZK63
STRING 9031.ENSGALP00000005126
PaxDb Q5ZK63
PRIDE Q5ZK63
Ensembl ENSGALT00000005135
GeneID 427425
KEGG gga:427425
CTD 10923
eggNOG NOG280527
GeneTree ENSGT00390000008802
HOGENOM HOG000239157
HOVERGEN HBG028243
InParanoid Q5ZK63
OMA REYWMNQ
PhylomeDB Q5ZK63
NextBio 20828685
PRO PR:Q5ZK63
Proteomes UP000000539
GO GO:0005634
GO:0003677
GO:0003713
GO:0006355
GO:0006351
Gene3D 2.30.31.10
InterPro IPR003173
IPR009044
Pfam PF02229
SUPFAM SSF54447

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0060261

positive regulation of transcription initiation from RNA polymerase II promoter

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325022
PomBase:SPAC16A10.02

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325022
UniProtKB:P53999

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015299
PANTHER:PTN000325022
PomBase:SPAC16A10.02
RGD:621582
SGD:S000004642
UniProtKB:P53999

C

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325022
PomBase:SPAC16A10.02
SGD:S000004642
UniProtKB:P53999

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003173
InterPro:IPR009044

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003173
InterPro:IPR009044

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page