CHICK:SNF5

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	SMARCB1
Protein Name(s)	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
External Links
UniProt	Q5ZK40
EMBL	AJ720244
RefSeq	NP_001034344.1
UniGene	Gga.4349 Gga.48681
STRING	9031.ENSGALP00000009608
PaxDb	Q5ZK40
Ensembl	ENSGALT00000009622
GeneID	769489
KEGG	gga:769489
CTD	4320
eggNOG	NOG291299
GeneTree	ENSGT00440000038585
HOGENOM	HOG000015760
HOVERGEN	HBG011709
InParanoid	Q5ZK40
KO	K11648
OMA	AFLHTNI
OrthoDB	EOG7MSMP4
PhylomeDB	Q5ZK40
TreeFam	TF105993
NextBio	20813862
PRO	PR:Q5ZK40
Proteomes	UP000000539
GO	GO:0090544 GO:0071565 GO:0071564 GO:0000790 GO:0005730 GO:0005634 GO:0016514 GO:0001741 GO:0000978 GO:0000980 GO:0003713 GO:0043044 GO:0030154 GO:0006281 GO:0044772 GO:0008285 GO:0007399 GO:0006337 GO:0043923 GO:0051091 GO:0045944 GO:0006357 GO:0039692 GO:0006351
InterPro	IPR006939 IPR017393
PANTHER	PTHR10019
Pfam	PF04855
PIRSF	PIRSF038126

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
enables	GO:0003677	DNA binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q12824	F		Seeded From UniProt	complete
part_of	GO:0071565	nBAF complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1328366 PANTHER:PTN000797502	C		Seeded From UniProt	complete
part_of	GO:0071564	npBAF complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1328366 PANTHER:PTN000797502	C		Seeded From UniProt	complete
involved_in	GO:0043044	ATP-dependent chromatin remodeling		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000001217 SGD:S000004313	P		Seeded From UniProt	complete
part_of	GO:0035060	brahma complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0011715 PANTHER:PTN000797502	C		Seeded From UniProt	complete
part_of	GO:0016514	SWI/SNF complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1328366 PANTHER:PTN000001217 PomBase:SPAC2F7.08c SGD:S000000493 UniProtKB:Q12824	C		Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0011715 PANTHER:PTN000001217 PomBase:SPAC2F7.08c UniProtKB:A0A1D8PJZ6	P		Seeded From UniProt	complete
involved_in	GO:0006337	nucleosome disassembly		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000001217 SGD:S000004313 UniProtKB:Q12824	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0011715 MGI:MGI:1328366 PANTHER:PTN000001217 RGD:1308761 SGD:S000000493 UniProtKB:P93045 UniProtKB:Q12824	C		Seeded From UniProt	complete
enables	GO:0003713	transcription coactivator activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000797502 UniProtKB:Q12824	F		Seeded From UniProt	complete
involved_in	GO:1903508	positive regulation of nucleic acid-templated transcription	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0003713	P		Seeded From UniProt	complete
part_of	GO:0043231	intracellular membrane-bounded organelle	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:G5E975 ensembl:ENSP00000340883	C		Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:G5E975 ensembl:ENSP00000340883	C		Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:G5E975 ensembl:ENSP00000340883	C		Seeded From UniProt	complete
part_of	GO:0071565	nBAF complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	C		Seeded From UniProt	complete
part_of	GO:0071564	npBAF complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	C		Seeded From UniProt	complete
involved_in	GO:0030154	cell differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	P		Seeded From UniProt	complete
part_of	GO:0016514	SWI/SNF complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	C		Seeded From UniProt	complete
involved_in	GO:0008285	negative regulation of cell population proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9Z0H3 ensembl:ENSMUSP00000000925	C		Seeded From UniProt	complete
part_of	GO:0000228	nuclear chromosome	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006939	C		Seeded From UniProt	complete
involved_in	GO:0006338	chromatin remodeling	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006939 InterPro:IPR017393	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
involved_in	GO:0007399	nervous system development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0524	P		Seeded From UniProt	complete
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References

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