GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:SLU7
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | SLU7 | |
Protein Name(s) | Pre-mRNA-splicing factor SLU7 | |
External Links | ||
UniProt | Q5ZIG2 | |
EMBL | AJ720822 | |
RefSeq | NP_001006146.1 | |
UniGene | Gga.20067 | |
STRING | 9031.ENSGALP00000002277 | |
PaxDb | Q5ZIG2 | |
PRIDE | Q5ZIG2 | |
GeneID | 416157 | |
KEGG | gga:416157 | |
CTD | 10569 | |
eggNOG | NOG251791 | |
HOGENOM | HOG000194391 | |
HOVERGEN | HBG053287 | |
InParanoid | Q5ZIG2 | |
KO | K12819 | |
PhylomeDB | Q5ZIG2 | |
NextBio | 20819662 | |
PRO | PR:Q5ZIG2 | |
Proteomes | UP000000539 | |
GO | GO:0005681 GO:0003676 GO:0008270 GO:0006397 GO:0008380 | |
InterPro | IPR021715 IPR001878 | |
Pfam | PF11708 | |
SMART | SM00343 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000310059 |
C |
Seeded From UniProt |
complete | ||
contributes_to |
GO:0000386 |
second spliceosomal transesterification activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000310059 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000386 |
second spliceosomal transesterification activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030628 |
pre-mRNA 3'-splice site binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page