GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:RL22

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) RPL22
Protein Name(s) 60S ribosomal protein L22
External Links
UniProt Q98TF8
EMBL AB046394
RefSeq NP_989472.1
UniGene Gga.9333
BioGrid 674987
STRING 9031.ENSGALP00000039778
PaxDb Q98TF8
PRIDE Q98TF8
GeneID 373937
KEGG gga:373937
CTD 6146
eggNOG NOG260326
HOGENOM HOG000198396
HOVERGEN HBG004373
InParanoid Q98TF8
KO K02891
PhylomeDB Q98TF8
NextBio 20813469
PRO PR:Q98TF8
Proteomes UP000000539
GO GO:0005840
GO:0003735
GO:0006412
InterPro IPR002671
PANTHER PTHR10064
Pfam PF01776

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0022625

cytosolic large ribosomal subunit

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002559998
RGD:621189
SGD:S000004051
SGD:S000006436
TAIR:locus:2024715
TAIR:locus:2078107
TAIR:locus:2180260

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002559998
TAIR:locus:2078107
TAIR:locus:2180260
ZFIN:ZDB-GENE-051113-276
ZFIN:ZDB-GENE-060804-3

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000007073
ZFIN:ZDB-GENE-051113-276
ZFIN:ZDB-GENE-060804-3

F

Seeded From UniProt

complete

involved_in

GO:0099577

regulation of translation at presynapse, modulating synaptic transmission

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

P

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

C

Seeded From UniProt

complete

involved_in

GO:0046632

alpha-beta T cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

P

Seeded From UniProt

complete

enables

GO:0045182

translation regulator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

F

Seeded From UniProt

complete

enables

GO:0008201

heparin binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

F

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P67984
ensembl:ENSMUSP00000118787

C

Seeded From UniProt

complete

enables

GO:0003735

structural constituent of ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002671

F

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002671

C

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002671

P

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0689

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page