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CHICK:Q98934
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Nuclear orphan receptor ROR-beta (ECO:0000313 with EMBL:CAA69928.1)
Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000024399) | |
External Links | ||
UniProt | Q98934 | |
EMBL | AC186542 AC187587 KJ465914 Y08638 | |
RefSeq | NP_990424.1 | |
UniGene | Gga.581 | |
SMR | Q98934 | |
STRING | 9031.ENSGALP00000024400 | |
Ensembl | ENSGALT00000024445 | |
GeneID | 395980 | |
KEGG | gga:395980 | |
CTD | 6096 | |
eggNOG | NOG324222 | |
GeneTree | ENSGT00760000119049 | |
HOGENOM | HOG000010200 | |
HOVERGEN | HBG106848 | |
KO | K08533 | |
OMA | WEQLHDY | |
OrthoDB | EOG79PJNW | |
PhylomeDB | Q98934 | |
Reactome | REACT_258806 | |
NextBio | 20816045 | |
Proteomes | UP000000539 | |
GO | GO:0005634 GO:0004879 GO:0043565 GO:0003707 GO:0008270 GO:0035881 GO:0045668 GO:0045893 GO:0042752 GO:0046549 GO:0046548 | |
Gene3D | 1.10.565.10 3.30.50.10 | |
InterPro | IPR008946 IPR000536 IPR003079 IPR001723 IPR001628 IPR013088 | |
Pfam | PF00104 PF00105 | |
PRINTS | PR01293 PR00398 PR00047 | |
SMART | SM00430 SM00399 | |
SUPFAM | SSF48508 | |
PROSITE | PS00031 PS51030 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0008502 |
melatonin receptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001182210 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008502 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030522 |
intracellular receptor signaling pathway |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004879 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043401 |
steroid hormone mediated signaling pathway |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003707 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046549 |
retinal cone cell development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046548 |
retinal rod cell development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045668 |
negative regulation of osteoblast differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042752 |
regulation of circadian rhythm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042462 |
eye photoreceptor cell development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8R1B8 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003707 |
steroid hormone receptor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004879 |
nuclear receptor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001628 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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