GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:Q71LH8
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | LMO2 (ECO:0000313 with EMBL:AAL78036.1) | |
| Protein Name(s) | LIM domain-containing transcription factor (ECO:0000313 with EMBL:AAL78036.1) | |
| External Links | ||
| UniProt | Q71LH8 | |
| EMBL | AF468789 | |
| RefSeq | NP_989602.1 | |
| UniGene | Gga.74 | |
| ProteinModelPortal | Q71LH8 | |
| SMR | Q71LH8 | |
| STRING | 9031.ENSGALP00000000470 | |
| PaxDb | Q71LH8 | |
| PRIDE | Q71LH8 | |
| GeneID | 374129 | |
| KEGG | gga:374129 | |
| CTD | 4005 | |
| eggNOG | NOG319108 | |
| HOGENOM | HOG000232175 | |
| HOVERGEN | HBG054231 | |
| KO | K15612 | |
| PhylomeDB | Q71LH8 | |
| NextBio | 20813644 | |
| ExpressionAtlas | Q71LH8 | |
| GO | GO:0005634 GO:0005667 GO:0003682 GO:0048037 GO:0070888 GO:0000977 GO:0001190 GO:0001228 GO:0008270 GO:0097067 GO:0035162 GO:0042789 GO:0045647 | |
| Gene3D | 2.10.110.10 | |
| InterPro | IPR001781 | |
| Pfam | PF00412 | |
| SMART | SM00132 | |
| PROSITE | PS00478 PS50023 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003896 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003896 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0097067 |
cellular response to thyroid hormone stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0070888 |
E-box binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0048037 |
cofactor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043425 |
bHLH transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042789 |
mRNA transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001102 |
RNA polymerase II activating transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P25791 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
d
r