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CHICK:Q71LH8

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) LMO2 (ECO:0000313 with EMBL:AAL78036.1)
Protein Name(s) LIM domain-containing transcription factor (ECO:0000313 with EMBL:AAL78036.1)
External Links
UniProt Q71LH8
EMBL AF468789
RefSeq NP_989602.1
UniGene Gga.74
ProteinModelPortal Q71LH8
SMR Q71LH8
STRING 9031.ENSGALP00000000470
PaxDb Q71LH8
PRIDE Q71LH8
GeneID 374129
KEGG gga:374129
CTD 4005
eggNOG NOG319108
HOGENOM HOG000232175
HOVERGEN HBG054231
KO K15612
PhylomeDB Q71LH8
NextBio 20813644
ExpressionAtlas Q71LH8
GO GO:0005634
GO:0005667
GO:0003682
GO:0048037
GO:0070888
GO:0000977
GO:0001190
GO:0001228
GO:0008270
GO:0097067
GO:0035162
GO:0042789
GO:0045647
Gene3D 2.10.110.10
InterPro IPR001781
Pfam PF00412
SMART SM00132
PROSITE PS00478
PS50023

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003896
MGI:MGI:101791
MGI:MGI:109156
PANTHER:PTN001197649
RGD:61957
UniProtKB:P50211
UniProtKB:P61371
WB:WBGene00002989
ZFIN:ZDB-GENE-980526-112

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003896
PANTHER:PTN001197649
RGD:61957
UniProtKB:P61371

F

Seeded From UniProt

complete

involved_in

GO:0097067

cellular response to thyroid hormone stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

P

Seeded From UniProt

complete

enables

GO:0070888

E-box binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

enables

GO:0048037

cofactor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

P

Seeded From UniProt

complete

enables

GO:0043425

bHLH transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

involved_in

GO:0042789

mRNA transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

C

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

enables

GO:0001102

RNA polymerase II activating transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P25791
ensembl:ENSP00000257818

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page