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CHICK:Q5ZMB8

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PSMC2 (ECO:0000313 with Ensembl:ENSGALP00000013388)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAG31125.1, ECO:0000313 with Ensembl:ENSGALP00000013388)
External Links
UniProt Q5ZMB8
EMBL AADN03000142
AJ719466
RefSeq NP_001006225.1
UniGene Gga.7131
STRING 9031.ENSGALP00000038805
PaxDb Q5ZMB8
Ensembl ENSGALT00000013403
GeneID 417716
KEGG gga:417716
CTD 5701
eggNOG COG1222
GeneTree ENSGT00550000074978
HOGENOM HOG000225143
HOVERGEN HBG000109
KO K03061
OMA FQVARCT
OrthoDB EOG7TF78Z
PhylomeDB Q5ZMB8
Reactome REACT_202415
REACT_209027
NextBio 20820971
PRO PR:Q5ZMB8
Proteomes UP000000539
GO GO:0000932
GO:0016020
GO:0005634
GO:0022624
GO:0005524
GO:0016887
GO:0001649
GO:0006511
Gene3D 3.40.50.300
InterPro IPR005937
IPR003593
IPR003959
IPR003960
IPR027417
Pfam PF00004
SMART SM00382
SUPFAM SSF52540
TIGRFAMs TIGR01242
PROSITE PS00674

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045899

positive regulation of RNA polymerase II transcriptional preinitiation complex assembly

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553404
SGD:S000001628

P

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553408
RGD:3428

C

Seeded From UniProt

complete

enables

GO:0017025

TBP-class protein binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553404
RGD:3428

F

Seeded From UniProt

complete

part_of

GO:0008540

proteasome regulatory particle, base subcomplex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028687
PANTHER:PTN000553404
PomBase:SPBC16C6.07c
SGD:S000001628
TAIR:locus:2024822

C

Seeded From UniProt

complete

involved_in

GO:1901800

positive regulation of proteasomal protein catabolic process

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0036402

P

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35998
ensembl:ENSP00000391211

C

Seeded From UniProt

complete

enables

GO:0016887

ATPase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35998
ensembl:ENSP00000391211

F

Seeded From UniProt

complete

involved_in

GO:0006511

ubiquitin-dependent protein catabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35998
ensembl:ENSP00000391211

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35998
ensembl:ENSP00000391211

C

Seeded From UniProt

complete

part_of

GO:0000502

proteasome complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35998
ensembl:ENSP00000391211

C

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A140VK70
ensembl:ENSP00000391211

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A140VK70
ensembl:ENSP00000391211

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003959
InterPro:IPR003960

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

C

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

F

Seeded From UniProt

complete

involved_in

GO:0030163

protein catabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

P

Seeded From UniProt

complete

enables

GO:0036402

proteasome-activating ATPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR035245

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page