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CHICK:Q59J86

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) No Information Provided.
Protein Name(s) DNA polymerase (ECO:0000256 with RuleBase:RU000442)
External Links
UniProt Q59J86
EMBL AB178529
UniGene Gga.12097
STRING 9031.ENSGALP00000026266
PaxDb Q59J86
eggNOG COG0417
HOGENOM HOG000163524
HOVERGEN HBG080008
PhylomeDB Q59J86
GO GO:0005658
GO:0005635
GO:0016363
GO:0005730
GO:0005654
GO:0005634
GO:0003682
GO:0003677
GO:0030337
GO:0003896
GO:0003887
GO:0001882
GO:0000166
GO:0032403
GO:0030154
GO:0008283
GO:0006260
GO:0006270
GO:0006269
GO:0006271
GO:0000731
GO:0006303
GO:0006273
GO:0006272
GO:0006298
GO:0045596
GO:0046677
Gene3D 3.30.420.10
3.90.1600.10
InterPro IPR006172
IPR017964
IPR006133
IPR006134
IPR024647
IPR023211
IPR029702
IPR012337
IPR015088
PANTHER PTHR10322:SF18
Pfam PF12254
PF00136
PF03104
PF08996
PRINTS PR00106
SMART SM00486
SUPFAM SSF53098
PROSITE PS00116

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0006261

DNA-dependent DNA replication

PMID:3930505[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:3930505[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

PMID:1814437[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q5ZM06

F

Seeded From UniProt

complete

part_of

GO:0005658

alpha DNA polymerase:primase complex

PMID:1814437[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q5ZM06

C

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:1814437[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:8002003[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:8002003[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005658

alpha DNA polymerase:primase complex

PMID:8002003[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0046677

response to antibiotic

PMID:6588970[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045596

negative regulation of cell differentiation

PMID:3527815[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

PMID:2415123[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q5ZM06

F

Seeded From UniProt

complete

enables

GO:0030337

DNA polymerase processivity factor activity

PMID:3930505[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

PMID:3527815[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006298

mismatch repair

PMID:3941068[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

PMID:3527815[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

PMID:6588970[4]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005658

alpha DNA polymerase:primase complex

PMID:2415123[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q5ZM06

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:3527815[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:6355128[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003896

DNA primase activity

PMID:2415123[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:7068647[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:2415123[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

PMID:6355128[8]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:3941068[7]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000731

DNA synthesis involved in DNA repair

PMID:3930505[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016363

nuclear matrix

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

involved_in

GO:0008283

cell population proliferation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

NOT|involved_in

GO:0006281

DNA repair

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006273

lagging strand elongation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006272

leading strand elongation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006271

DNA strand elongation involved in DNA replication

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006270

DNA replication initiation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

part_of

GO:0005658

alpha DNA polymerase:primase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

involved_in

GO:0006269

DNA replication, synthesis of RNA primer

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

F

Seeded From UniProt

complete

colocalizes_with

GO:0000785

chromatin

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

C

Seeded From UniProt

complete

NOT|involved_in

GO:1904161

DNA synthesis involved in UV-damage excision repair

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

P

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P09884

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006134
InterPro:IPR006172
InterPro:IPR017964

F

Seeded From UniProt

complete

enables

GO:0001882

nucleoside binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015088

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006172
InterPro:IPR017964
InterPro:IPR036397

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006134

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006172
InterPro:IPR015088
InterPro:IPR017964

F

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015088

P

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.7.7.7

F

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0235

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

enables

GO:0051536

iron-sulfur cluster binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0411

F

Seeded From UniProt

complete

enables

GO:0016779

nucleotidyltransferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0548

F

Seeded From UniProt

complete

enables

GO:0003887

DNA-directed DNA polymerase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0239

F

Seeded From UniProt

complete

enables

GO:0051539

4 iron, 4 sulfur cluster binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0004

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Kunkel, TA (1985) The mutational specificity of DNA polymerases-alpha and -gamma during in vitro DNA synthesis. J. Biol. Chem. 260 12866-74 PubMed GONUTS page
  2. 2.0 2.1 2.2 Ray, S et al. (1991) Developmental expression of the embryonic chicken brain DNA polymerase alpha and its binding with monoclonal antibodies against human KB cell DNA polymerase alpha. Cell Growth Differ. 2 567-73 PubMed GONUTS page
  3. 3.0 3.1 3.2 Ray, S et al. (1994) Characterization of DNA polymerase-alpha/primase complex from developing embryonic chicken brains. Indian J. Biochem. Biophys. 31 226-35 PubMed GONUTS page
  4. 4.0 4.1 Rusquet, R et al. (1984) Quinolone antibiotics inhibit eucaryotic DNA polymerase alpha and beta, terminal deoxynucleotidyl transferase but not DNA ligase. Biochem. Biophys. Res. Commun. 121 762-9 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 Matsukage, A et al. (1986) Differentiation of lens and neural cells in chicken embryos is accompanied by simultaneous decay of DNA replication machinery. Dev. Biol. 117 226-32 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Hirose, F et al. (1985) Monoclonal antibody specific for chicken DNA polymerase alpha associated with DNA primase. Biochem. Biophys. Res. Commun. 132 210-6 PubMed GONUTS page
  7. 7.0 7.1 Kunkel, TA & Alexander, PS (1986) The base substitution fidelity of eucaryotic DNA polymerases. Mispairing frequencies, site preferences, insertion preferences, and base substitution by dislocation. J. Biol. Chem. 261 160-6 PubMed GONUTS page
  8. 8.0 8.1 Matsukage, A et al. (1983) Immunocytochemical localization of chick DNA polymerases alpha and beta +. J. Cell. Physiol. 117 266-71 PubMed GONUTS page
  9. Yamaguchi, M et al. (1982) Chick embryo DNA polymerase alpha. Polypeptide components and their microheterogeneity. J. Biol. Chem. 257 4484-9 PubMed GONUTS page