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CHICK:O93582

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) Alx-4 (ECO:0000313 with EMBL:AAC61772.1) (synonyms: ALX4 (ECO:0000313 with Ensembl:ENSGALP00000041225))
Protein Name(s) Paired type homeodomain protein (ECO:0000313 with EMBL:AAC61772.1)

Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000041225)

External Links
UniProt O93582
EMBL AADN03004717
AF092538
RefSeq NP_989493.1
UniGene Gga.934
SMR O93582
STRING 9031.ENSGALP00000013005
Ensembl ENSGALT00000044482
GeneID 373976
KEGG gga:373976
CTD 60529
eggNOG NOG309608
GeneTree ENSGT00760000118958
HOGENOM HOG000231518
HOVERGEN HBG004214
KO K09451
OMA PSCMSPH
PhylomeDB O93582
TreeFam TF350743
NextBio 20813505
PRO PR:O93582
Proteomes UP000000539
GO GO:0005634
GO:0043565
GO:0007275
GO:0006355
Gene3D 1.10.10.60
InterPro IPR017970
IPR001356
IPR009057
IPR003654
Pfam PF00046
PF03826
SMART SM00389
SUPFAM SSF46689
PROSITE PS00027
PS50071
PS50803

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011701
FB:FBgn0023489
MGI:MGI:104621
MGI:MGI:106633
MGI:MGI:108359
MGI:MGI:1096388
MGI:MGI:1100882
MGI:MGI:1920864
PANTHER:PTN002518769
RGD:1560582
RGD:1562672
RGD:2273
UniProtKB:O14813
UniProtKB:Q15699
UniProtKB:Q8N693
UniProtKB:Q8NHV9
UniProtKB:Q99453
UniProtKB:Q9H161
WB:WBGene00000435
WB:WBGene00000440
WB:WBGene00006744
WB:WBGene00044330

C

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108359
PANTHER:PTN002803099

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0023489
MGI:MGI:108359
MGI:MGI:1918847
PANTHER:PTN002518769
UniProtKB:Q15699
UniProtKB:Q8N693
UniProtKB:Q96QS3
WB:WBGene00000440

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011701
FB:FBgn0023489
MGI:MGI:108359
MGI:MGI:1097716
PANTHER:PTN002518769
UniProtKB:O14813
UniProtKB:Q15699
UniProtKB:Q8N693
UniProtKB:Q99453
WB:WBGene00044330

F

Seeded From UniProt

complete

enables

GO:0071837

HMG box domain binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

involved_in

GO:0060021

roof of mouth development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0048705

skeletal system morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0048704

embryonic skeletal system morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0048565

digestive tract development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

involved_in

GO:0042981

regulation of apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0042733

embryonic digit morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0035116

embryonic hindlimb morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0035115

embryonic forelimb morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0035108

limb morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0009952

anterior/posterior pattern specification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0009791

post-embryonic development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0007517

muscle organ development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0007389

pattern specification process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O35137
ensembl:ENSMUSP00000047962

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9H161
ensembl:ENSP00000332744

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR009057

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033203

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033203

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033203

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414434

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414434

C

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414434

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page