GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:O93480

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) CBX1 (ECO:0000313 with Ensembl:ENSGALP00000029248)
Protein Name(s) Chromobox protein (CHCB1) (ECO:0000313 with EMBL:BAA33400.1)

Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000029248)

External Links
UniProt O93480
EMBL AADN03008627
AADN03008690
AB005617
RefSeq NP_989663.1
UniGene Gga.25863
SMR O93480
STRING 9031.ENSGALP00000000308
Ensembl ENSGALT00000029894
ENSGALT00000045933
GeneID 374237
KEGG gga:374237
CTD 10951
eggNOG NOG264487
GeneTree ENSGT00510000046310
HOGENOM HOG000220852
HOVERGEN HBG000400
KO K11585
OMA ASTMGKK
OrthoDB EOG7QRQWW
PhylomeDB O93480
TreeFam TF350503
NextBio 20813735
PRO PR:O93480
Proteomes UP000000539
GO GO:0010369
GO:0001939
GO:0001940
GO:0005721
GO:0005819
GO:0045892
InterPro IPR017984
IPR023780
IPR000953
IPR008251
IPR016197
IPR023779
Pfam PF00385
PF01393
PRINTS PR00504
SMART SM00298
SM00300
SUPFAM SSF54160
PROSITE PS00598
PS50013

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0003779

actin binding

PMID:16487625[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9DEE9

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

F

Seeded From UniProt

complete

part_of

GO:0010369

chromocenter

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

part_of

GO:0005721

pericentric heterochromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

part_of

GO:0001940

male pronucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

part_of

GO:0001939

female pronucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

part_of

GO:0000785

chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

C

Seeded From UniProt

complete

enables

GO:1990226

histone methyltransferase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

F

Seeded From UniProt

complete

part_of

GO:0090734

site of DNA damage

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

P

Seeded From UniProt

complete

part_of

GO:0005819

spindle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

part_of

GO:0000785

chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

part_of

GO:0000784

nuclear chromosome, telomeric region

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

part_of

GO:0000775

chromosome, centromeric region

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83916
ensembl:ENSP00000377060

C

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

P

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P83917
ensembl:ENSMUSP00000091475

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR008251

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Ohfuchi, E et al. (2006) Vertebrate Arp6, a novel nuclear actin-related protein, interacts with heterochromatin protein 1. Eur. J. Cell Biol. 85 411-21 PubMed GONUTS page