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CHICK:MYF5
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | MYF5 | |
| Protein Name(s) | Myogenic factor 5
Myf-5 | |
| External Links | ||
| UniProt | Q08856 | |
| EMBL | X73250 | |
| PIR | S41126 | |
| RefSeq | NP_001025534.1 | |
| UniGene | Gga.379 | |
| ProteinModelPortal | Q08856 | |
| SMR | Q08856 | |
| STRING | 9031.ENSGALP00000030022 | |
| PaxDb | Q08856 | |
| GeneID | 395633 | |
| KEGG | gga:395633 | |
| CTD | 4617 | |
| eggNOG | NOG239177 | |
| HOGENOM | HOG000234800 | |
| HOVERGEN | HBG006429 | |
| InParanoid | Q08856 | |
| KO | K18484 | |
| PhylomeDB | Q08856 | |
| NextBio | 20815706 | |
| PRO | PR:Q08856 | |
| Proteomes | UP000000539 | |
| GO | GO:0005634 GO:0003677 GO:0046982 GO:0042693 GO:0007517 GO:0006355 GO:0006351 | |
| Gene3D | 4.10.280.10 | |
| InterPro | IPR002546 IPR011598 IPR022032 | |
| Pfam | PF01586 PF00010 PF12232 | |
| SMART | SM00520 SM00353 | |
| SUPFAM | SSF47459 | |
| PROSITE | PS50888 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0090575 |
RNA polymerase II transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
contributes_to |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042693 |
muscle cell fate commitment |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1901741 |
positive regulation of myoblast fusion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000164853 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048743 |
positive regulation of skeletal muscle fiber development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97276 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97252 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0045663 |
positive regulation of myoblast differentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97276 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0035914 |
skeletal muscle cell differentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97252 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002922 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97252 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97275 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007517 |
muscle organ development |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046983 |
protein dimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007517 |
muscle organ development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Dechesne, CA et al. (1994) E-box- and MEF-2-independent muscle-specific expression, positive autoregulation, and cross-activation of the chicken MyoD (CMD1) promoter reveal an indirect regulatory pathway. Mol. Cell. Biol. 14 5474-86 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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- Phasianidae
- Phasianinae
- GO:0045663 ! positive regulation of myoblast differentiation
- GO:1901741 ! positive regulation of myoblast fusion
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0048743 ! positive regulation of skeletal muscle fiber development
- GO:0046983 ! protein dimerization activity
- GO:0046982 ! protein heterodimerization activity
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