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CHICK:HDAC9

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) hdac9
Protein Name(s) Histone deacetylase 9
External Links
UniProt Q5ZKH6
EMBL AJ720108
UniGene Gga.1378
ProteinModelPortal Q5ZKH6
SMR Q5ZKH6
STRING 9031.ENSGALP00000017619
PaxDb Q5ZKH6
eggNOG COG0123
HOGENOM HOG000232065
HOVERGEN HBG057100
InParanoid Q5ZKH6
PhylomeDB Q5ZKH6
Proteomes UP000000539
GO GO:0035097
GO:0032041
GO:0003714
GO:0007507
GO:0000122
GO:0045892
GO:0048742
GO:0051153
GO:0006351
InterPro IPR000286
IPR024643
PANTHER PTHR10625
Pfam PF12203

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

P

Seeded From UniProt

complete

involved_in

GO:0007507

heart development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

P

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

P

Seeded From UniProt

complete

involved_in

GO:0051153

regulation of striated muscle cell differentiation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

P

Seeded From UniProt

complete

involved_in

GO:0048742

regulation of skeletal muscle fiber development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

P

Seeded From UniProt

complete

part_of

GO:0035097

histone methyltransferase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99N13

C

Seeded From UniProt

complete

enables

GO:0070491

repressing transcription factor binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1931221
PANTHER:PTN002556285

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1931221
PANTHER:PTN002556285

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1931221
PANTHER:PTN002556285

P

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004407

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0032041

P

Seeded From UniProt

complete

enables

GO:0032041

NAD-dependent histone deacetylase activity (H3-K14 specific)

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page