CHICK:ERCC3

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	ERCC3
Protein Name(s)	TFIIH basal transcription factor complex helicase XPB subunit DNA excision repair protein ERCC-3
External Links
UniProt	Q5ZKK7
EMBL	AJ720077
UniGene	Gga.4898
ProteinModelPortal	Q5ZKK7
STRING	9031.ENSGALP00000018752
PaxDb	Q5ZKK7
CTD	2071
eggNOG	COG1061
HOGENOM	HOG000160172
HOVERGEN	HBG051499
InParanoid	Q5ZKK7
PhylomeDB	Q5ZKK7
Reactome	REACT_115867
NextBio	20826586
PRO	PR:Q5ZKK7
Proteomes	UP000000539
GO	GO:0005675 GO:0005654 GO:0005524 GO:0004003 GO:0003677 GO:0006281 GO:0006289 GO:0006468 GO:0006355 GO:0006366
Gene3D	3.40.50.300
InterPro	IPR006935 IPR014001 IPR001650 IPR001161 IPR027417
Pfam	PF00271 PF04851
PRINTS	PR00851
SMART	SM00487 SM00490
SUPFAM	SSF52540
TIGRFAMs	TIGR00603
PROSITE	PS51192 PS51194

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
contributes_to	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P19447	F	Seeded From UniProt	complete
contributes_to	GO:0008094	DNA-dependent ATPase activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P19447	F	Seeded From UniProt	complete
involved_in	GO:0006366	transcription by RNA polymerase II	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P19447	P	Seeded From UniProt	complete
part_of	GO:0005675	transcription factor TFIIH holo complex	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P19447	C	Seeded From UniProt	complete
contributes_to	GO:0004672	protein kinase activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P19447	F	Seeded From UniProt	complete
part_of	GO:0097550	transcriptional preinitiation complex	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 SGD:S000001405	C	Seeded From UniProt	complete
enables	GO:0043138	3'-5' DNA helicase activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 UniProtKB:P19447	F	Seeded From UniProt	complete
involved_in	GO:0033683	nucleotide-excision repair, DNA incision	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 SGD:S000001405 UniProtKB:P19447	P	Seeded From UniProt	complete
involved_in	GO:0009411	response to UV	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0001179 MGI:MGI:95414 PANTHER:PTN000138598 TAIR:locus:2177891 TAIR:locus:2177901 UniProtKB:P19447 dictyBase:DDB_G0278729	P	Seeded From UniProt	complete
contributes_to	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 UniProtKB:P19447	F	Seeded From UniProt	complete
enables	GO:0008134	transcription factor binding	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 UniProtKB:P19447	F	Seeded From UniProt	complete
involved_in	GO:0006367	transcription initiation from RNA polymerase II promoter	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 PomBase:SPAC17A5.06 SGD:S000001405	P	Seeded From UniProt	complete
involved_in	GO:0006366	transcription by RNA polymerase II	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0001179 PANTHER:PTN000138598 PomBase:SPAC17A5.06 SGD:S000001405 UniProtKB:P19447	P	Seeded From UniProt	complete
part_of	GO:0005675	transcription factor TFIIH holo complex	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0001179 PANTHER:PTN000138598 SGD:S000001405 UniProtKB:P19447	C	Seeded From UniProt	complete
enables	GO:0004003	ATP-dependent DNA helicase activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 SGD:S000001405	F	Seeded From UniProt	complete
colocalizes_with	GO:0000439	transcription factor TFIIH core complex	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 RGD:1307139 SGD:S000001405	C	Seeded From UniProt	complete
part_of	GO:0000112	nucleotide-excision repair factor 3 complex	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000138598 SGD:S000001405	C	Seeded From UniProt	complete
involved_in	GO:0006468	protein phosphorylation	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004672	P	Seeded From UniProt	complete
involved_in	GO:0006468	protein phosphorylation	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0008353	P	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004003	P	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004003	P	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0043138	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006935	F	Seeded From UniProt	complete
enables	GO:0004003	ATP-dependent DNA helicase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001161	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006935	F	Seeded From UniProt	complete
involved_in	GO:0006289	nucleotide-excision repair	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001161	P	Seeded From UniProt	complete
involved_in	GO:0006367	transcription initiation from RNA polymerase II promoter	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001161	P	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006935	F	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	Reactome:R-GGA-353377	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	Reactome:R-GGA-353476	ECO:0000304	author statement supported by traceable reference used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0234	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
enables	GO:0004386	helicase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0347	F	Seeded From UniProt	complete
involved_in	GO:0006974	cellular response to DNA damage stimulus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0227	P	Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0067	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.00 ^1.01 ^1.02 ^1.03 ^1.04 ^1.05 ^1.06 ^1.07 ^1.08 ^1.09 ^1.10 ^1.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.00 ^1.01 ^1.02 ^1.03 ^1.04 ^1.05 ^1.06 ^1.07 ^1.08 ^1.09 ^1.10 ^1.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:ERCC3

Contents

Annotations

Notes

References

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