CHICK:A7M7B9

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	chNthl1 (synonyms: NTHL1)
Protein Name(s)	Escherichia coli endonuclease III-like 1 Uncharacterized protein
External Links
UniProt	A7M7B9
EMBL	AADN03006815 AB358957
UniGene	Gga.11851 Gga.50978
ProteinModelPortal	A7M7B9
Ensembl	ENSGALT00000009013
GeneTree	ENSGT00510000047513
HOVERGEN	HBG052675
OrthoDB	EOG76MK8Z
TreeFam	TF314967
ArrayExpress	A7M7B9
GO	GO:0005634 GO:0051539 GO:0019104 GO:0003906 GO:0003690 GO:0004519 GO:0006285 GO:0006296
Gene3D	1.10.1670.10 1.10.340.30
InterPro	IPR011257 IPR004036 IPR004035 IPR003651 IPR003265 IPR000445 IPR003583 IPR023170 IPR005759
Pfam	PF00633 PF00730
PIRSF	PIRSF001435
SMART	SM00478 SM00525 SM00278
SUPFAM	SSF48150
PROSITE	PS00764 PS01155

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1313275 PANTHER:PTN000040498 UniProtKB:P78549	P	Seeded From UniProt	complete
involved_in	GO:0006285	base-excision repair, AP site formation	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000040498 PomBase:SPAC30D11.07 SGD:S000000013 SGD:S000005403 UniProtKB:P78549	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1313275 PANTHER:PTN000040500 PomBase:SPAC30D11.07 SGD:S000000013 SGD:S000005403 UniProtKB:P78549	C	Seeded From UniProt	complete
enables	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1313275 PANTHER:PTN000040498 SGD:S000000013 SGD:S000005403 TAIR:locus:2061345 UniProtKB:P78549	F	Seeded From UniProt	complete
enables	GO:0000703	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000040498 PomBase:SPAC30D11.07 SGD:S000000013 SGD:S000005403 WB:WBGene00011201	F	Seeded From UniProt	complete
enables	GO:0019104	DNA N-glycosylase activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O35980 ensembl:ENSMUSP00000047413	F	Seeded From UniProt	complete
involved_in	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O35980 ensembl:ENSMUSP00000047413	P	Seeded From UniProt	complete
part_of	GO:0005739	mitochondrion	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O35980 ensembl:ENSMUSP00000047413	C	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O35980 ensembl:ENSMUSP00000047413	C	Seeded From UniProt	complete
enables	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O35980 ensembl:ENSMUSP00000047413	F	Seeded From UniProt	complete
enables	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	F	Seeded From UniProt	complete
enables	GO:0019104	DNA N-glycosylase activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	F	Seeded From UniProt	complete
involved_in	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	P	Seeded From UniProt	complete
involved_in	GO:0006285	base-excision repair, AP site formation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	C	Seeded From UniProt	complete
enables	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	F	Seeded From UniProt	complete
enables	GO:0003690	double-stranded DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P78549 ensembl:ENSP00000219066	F	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000445	F	Seeded From UniProt	complete
enables	GO:0003824	catalytic activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011257	F	Seeded From UniProt	complete
enables	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030841	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030841	C	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011257 InterPro:IPR030841	P	Seeded From UniProt	complete
involved_in	GO:0006284	base-excision repair	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR003265	P	Seeded From UniProt	complete
involved_in	GO:0006285	base-excision repair, AP site formation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030841	P	Seeded From UniProt	complete
enables	GO:0019104	DNA N-glycosylase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030841	F	Seeded From UniProt	complete
enables	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:4.2.99.18	F	Seeded From UniProt	complete
part_of	GO:0005739	mitochondrion	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	C	Seeded From UniProt	complete
enables	GO:0000703	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	F	Seeded From UniProt	complete
enables	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	F	Seeded From UniProt	complete
enables	GO:0051539	4 iron, 4 sulfur cluster binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	C	Seeded From UniProt	complete
involved_in	GO:0006285	base-excision repair, AP site formation	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000166053	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
part_of	GO:0005739	mitochondrion	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0496 UniProtKB-SubCell:SL-0173	C	Seeded From UniProt	complete
enables	GO:0016829	lyase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0456	F	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
enables	GO:0051539	4 iron, 4 sulfur cluster binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0004	F	Seeded From UniProt	complete
enables	GO:0016798	hydrolase activity, acting on glycosyl bonds	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0326	F	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F	Seeded From UniProt	complete
involved_in	GO:0006974	cellular response to DNA damage stimulus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0227	P	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0234	P	Seeded From UniProt	complete
involved_in	GO:0008152	metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0326	P	Seeded From UniProt	complete
enables	GO:0051536	iron-sulfur cluster binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0411	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:A7M7B9

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