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CAEEL:ODD1
Contents
| Species (Taxon ID) | Caenorhabditis elegans. (6239) | |
| Gene Name(s) | odd-1 | |
| Protein Name(s) | Zinc finger protein odd-1 | |
| External Links | ||
| UniProt | P41995 | |
| EMBL | FO080148 | |
| PIR | T15298 | |
| RefSeq | NP_498552.2 | |
| UniGene | Cel.10969 | |
| ProteinModelPortal | P41995 | |
| SMR | P41995 | |
| STRING | 6239.B0280.4 | |
| EnsemblMetazoa | B0280.4 | |
| GeneID | 181893 | |
| KEGG | cel:CELE_B0280.4 | |
| UCSC | B0280.4 | |
| CTD | 181893 | |
| WormBase | B0280.4 | |
| eggNOG | COG5048 | |
| GeneTree | ENSGT00760000119344 | |
| HOGENOM | HOG000020433 | |
| InParanoid | P41995 | |
| KO | K09215 | |
| OMA | HKYIHAK | |
| OrthoDB | EOG74N5JN | |
| PhylomeDB | P41995 | |
| SignaLink | P41995 | |
| NextBio | 915704 | |
| Proteomes | UP000001940 | |
| GO | GO:0005634 GO:0003677 GO:0046872 GO:0007275 | |
| Gene3D | 3.30.160.60 | |
| InterPro | IPR007087 IPR015880 IPR013087 | |
| SMART | SM00355 | |
| PROSITE | PS00028 PS50157 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0006177 |
GMP biosynthetic process |
ECO:0000315 |
P |
Figure 1. Localization of the GMPs in interphase nuclei. |
complete | |||||
| GO:0006177 |
GMP biosynthetic process |
ECO:0000315 |
P |
Figure 2. Detergent resistant interaction of the GMPs with cellular chromatin. |
complete | |||||
| GO:0006177 |
GMP biosynthetic process |
ECO:0000315 |
P |
Figure 3. Representative confocal images illustrating the size of the LacO chromatin array in cells expressing LacR fused to the indicated GMPs. |
complete | |||||
| GO:0006177 |
GMP biosynthetic process |
ECO:0000315 |
P |
Figure 4. LCV- and RHV-GMPs show different mobility on chromatin. |
complete | |||||
|
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002985 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930813 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002985 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Mughal, N et al. (2013) Interaction of gamma-herpesvirus genome maintenance proteins with cellular chromatin. PLoS ONE 8 e62783 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page