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CAEEL:NRDE3
Contents
| Species (Taxon ID) | Caenorhabditis elegans. (6239) | |
| Gene Name(s) | nrde-3 | |
| Protein Name(s) | Nuclear RNAi defective-3 protein | |
| External Links | ||
| UniProt | Q21691 | |
| EMBL | FO080331 | |
| PIR | T16676 | |
| RefSeq | NP_508092.1 | |
| UniGene | Cel.23517 | |
| ProteinModelPortal | Q21691 | |
| SMR | Q21691 | |
| DIP | DIP-55715N | |
| IntAct | Q21691 | |
| STRING | 6239.R04A9.2 | |
| PaxDb | Q21691 | |
| EnsemblMetazoa | R04A9.2 | |
| GeneID | 180392 | |
| KEGG | cel:CELE_R04A9.2 | |
| UCSC | R04A9.2 | |
| CTD | 180392 | |
| WormBase | R04A9.2 | |
| eggNOG | NOG310650 | |
| GeneTree | ENSGT00760000119148 | |
| HOGENOM | HOG000016330 | |
| InParanoid | Q21691 | |
| OMA | YTRGPNA | |
| PhylomeDB | Q21691 | |
| NextBio | 909156 | |
| Proteomes | UP000001940 | |
| GO | GO:0005737 GO:0005634 GO:0031332 GO:0035197 GO:0006404 GO:0016246 | |
| InterPro | IPR003100 IPR003165 IPR012337 | |
| Pfam | PF02170 PF02171 | |
| SMART | SM00949 SM00950 | |
| SUPFAM | SSF101690 SSF53098 | |
| PROSITE | PS50821 PS50822 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005634 |
nucleus |
ECO:0000314 |
C |
Figure 2B |
complete | |||||
| GO:1900368 |
regulation of RNA interference |
ECO:0000315 |
P |
Figure 2 |
complete | |||||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1900368 |
regulation of RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008355 |
olfactory learning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(WBbt:0005672) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031332 |
RNAi effector complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0035197 |
siRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(WB:WBGene00003848) |
Seeded From UniProt |
complete | ||
|
enables |
GO:0035197 |
siRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016246 |
RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00145447 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016246 |
RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(GO:0005634) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006404 |
RNA import into nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031047 |
gene silencing by RNA |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Guang, S et al. (2010) Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. Nature 465 1097-101 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Guang, S et al. (2008) An Argonaute transports siRNAs from the cytoplasm to the nucleus. Science 321 537-41 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Juang, BT et al. (2013) Endogenous nuclear RNAi mediates behavioral adaptation to odor. Cell 154 1010-22 PubMed GONUTS page
- ↑ Burkhart, KB et al. (2011) A pre-mRNA-associating factor links endogenous siRNAs to chromatin regulation. PLoS Genet. 7 e1002249 PubMed GONUTS page
