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CAEEL:NRDE3

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Species (Taxon ID) Caenorhabditis elegans. (6239)
Gene Name(s) nrde-3
Protein Name(s) Nuclear RNAi defective-3 protein
External Links
UniProt Q21691
EMBL FO080331
PIR T16676
RefSeq NP_508092.1
UniGene Cel.23517
ProteinModelPortal Q21691
SMR Q21691
DIP DIP-55715N
IntAct Q21691
STRING 6239.R04A9.2
PaxDb Q21691
EnsemblMetazoa R04A9.2
GeneID 180392
KEGG cel:CELE_R04A9.2
UCSC R04A9.2
CTD 180392
WormBase R04A9.2
eggNOG NOG310650
GeneTree ENSGT00760000119148
HOGENOM HOG000016330
InParanoid Q21691
OMA YTRGPNA
PhylomeDB Q21691
NextBio 909156
Proteomes UP000001940
GO GO:0005737
GO:0005634
GO:0031332
GO:0035197
GO:0006404
GO:0016246
InterPro IPR003100
IPR003165
IPR012337
Pfam PF02170
PF02171
SMART SM00949
SM00950
SUPFAM SSF101690
SSF53098
PROSITE PS50821
PS50822

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005634

nucleus

PMID:20543824[1]

IDA: Inferred from Direct Assay

C

Figure 2B

complete
CACAO 7441

GO:1900368

regulation of RNA interference

PMID:18653886[2]

IMP: Inferred from Mutant Phenotype

P

Figure 2

complete
CACAO 7317

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003165
InterPro:IPR012337

F

Seeded From UniProt

complete

GO:0005515

protein binding

PMID:20543824[1]

IPI: Inferred from Physical Interaction

UniProtKB:G5EG51

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:18653886[2]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:20543824[1]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0006404

RNA import into nucleus

PMID:18653886[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0008355

olfactory learning

PMID:23993094[3]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0016246

RNA interference

PMID:18653886[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0016246

RNA interference

PMID:21901112[4]

IMP: Inferred from Mutant Phenotype

WB:WBVar00145447

P

Seeded From UniProt

complete

GO:0031047

gene silencing by RNA

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0943

P

Seeded From UniProt

complete

GO:0031332

RNAi effector complex

PMID:23993094[3]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0035197

siRNA binding

PMID:18653886[2]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

GO:0035197

siRNA binding

PMID:23993094[3]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

GO:1900368

regulation of RNA interference

PMID:18653886[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Guang, S et al. (2010) Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. Nature 465 1097-101 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 Guang, S et al. (2008) An Argonaute transports siRNAs from the cytoplasm to the nucleus. Science 321 537-41 PubMed GONUTS page
  3. 3.0 3.1 3.2 Juang, BT et al. (2013) Endogenous nuclear RNAi mediates behavioral adaptation to odor. Cell 154 1010-22 PubMed GONUTS page
  4. Burkhart, KB et al. (2011) A pre-mRNA-associating factor links endogenous siRNAs to chromatin regulation. PLoS Genet. 7 e1002249 PubMed GONUTS page