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BPSP1:DPOL
Contents
Species (Taxon ID) | Bacillus phage SP01 (Bacteriophage SP01). (10685) | |
Gene Name(s) | 31 | |
Protein Name(s) | DNA polymerase | |
External Links | ||
UniProt | P30314 | |
EMBL | M84415 M37686 | |
PIR | JC1269 | |
ProteinModelPortal | P30314 | |
GO | GO:0008408 GO:0003677 GO:0003887 GO:0039693 | |
Gene3D | 3.30.420.10 3.40.470.10 | |
InterPro | IPR002562 IPR019760 IPR001098 IPR002298 IPR012337 IPR005122 | |
Pfam | PF00476 PF01612 PF03167 | |
PRINTS | PR00868 | |
SMART | SM00474 SM00482 SM00986 | |
SUPFAM | SSF52141 SSF53098 | |
PROSITE | PS00447 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0004527 |
exonuclease activity |
ECO:0000247 |
|
F |
Matched 100% with Klenow fragment of DNA with an E-value of 3E-105. Figure 2 linked in the PubMed article shows both the nt and aa sequences of the DNA polymerase gene. These sequences were put together through experiments to assemble gene 31. When the subclones generated from the experiment were deemed too long and the resolution was poor, synthetic oligodeoxynucleotides were used as primers. Standard methods were used to manipulate the DNA. From the figure, it is said that "sequence data will appear in the GenBank Nuclcotide Sequence Database under accession No. M84415." |
complete | ||||
involved_in |
GO:0071897 |
DNA biosynthetic process |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003887 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071897 |
DNA biosynthetic process |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003887 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071897 |
DNA biosynthetic process |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003887 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0008408 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004527 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003887 |
DNA-directed DNA polymerase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006139 |
nucleobase-containing compound metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006261 |
DNA-dependent DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008408 |
3'-5' exonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003887 |
DNA-directed DNA polymerase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016779 |
nucleotidyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003887 |
DNA-directed DNA polymerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004527 |
exonuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006260 |
DNA replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0039693 |
viral DNA genome replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Scarlato, V & Gargano, S (1992) The DNA polymerase-encoding gene of Bacillus subtilis bacteriophage SPO1. Gene 118 109-13 PubMed GONUTS page
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