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BACSU:SINR

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Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) sinR (synonyms: flaD, sin)
Protein Name(s) HTH-type transcriptional regulator SinR
External Links
UniProt P06533
EMBL M14112
D84432
AL009126
PIR B25159
RefSeq NP_390341.1
PDB 1B0N
2YAL
3QQ6
3ZKC
PDBsum 1B0N
2YAL
3QQ6
3ZKC
ProteinModelPortal P06533
SMR P06533
DIP DIP-6102N
IntAct P06533
MINT MINT-1540382
STRING 224308.BSU24610
PaxDb P06533
EnsemblBacteria CAB14392
GeneID 938544
KEGG bsu:BSU24610
PATRIC 18976756
GenoList BSU24610
eggNOG COG1396
HOGENOM HOG000225390
InParanoid P06533
OMA ERNIQTN
OrthoDB EOG615VS0
PhylomeDB P06533
BioCyc BSUB:BSU24610-MONOMER
EvolutionaryTrace P06533
Proteomes UP000001570
GO GO:0043565
GO:0010629
GO:0006355
GO:0030435
GO:0006351
Gene3D 1.10.260.40
1.10.287.270
InterPro IPR001387
IPR010982
IPR010981
Pfam PF01381
PF08671
SMART SM00530
SUPFAM SSF47406
SSF47413
PROSITE PS50943
PS51500

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0010629

negative regulation of gene expression

PMID:15661000[1]

ECO:0000315

P

Table 1

complete
CACAO 2856

involved_in

GO:0010629

negative regulation of gene expression

PMID:15661000[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010982

F

Seeded From UniProt

complete

GO:0045892

negative regulation of transcription, DNA-templated

PMID:18978066[2]

ECO:0000315

P

Figure 4 shows a deletion of sinR in Bacillus subtilis “resulted in a fourfold increase in transcription from the yvcA promoter during exponential growth.”

complete
CACAO 13135

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010981
InterPro:IPR036281

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001387

F

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010981
InterPro:IPR036281

F

Seeded From UniProt

complete

involved_in

GO:0030435

sporulation resulting in formation of a cellular spore

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0749

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Kearns, DB et al. (2005) A master regulator for biofilm formation by Bacillus subtilis. Mol. Microbiol. 55 739-49 PubMed GONUTS page
  2. Verhamme, DT et al. (2009) DegU and Spo0A jointly control transcription of two loci required for complex colony development by Bacillus subtilis. J. Bacteriol. 191 100-8 PubMed GONUTS page