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ARATH:XCP1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | XCP1 | |
| Protein Name(s) | Xylem cysteine proteinase 1
AtXCP1 | |
| External Links | ||
| UniProt | O65493 | |
| EMBL | AF191027 AL022604 AL161587 CP002687 AK117394 BT005179 | |
| PIR | T06122 | |
| RefSeq | NP_567983.1 | |
| UniGene | At.2280 At.67622 | |
| ProteinModelPortal | O65493 | |
| SMR | O65493 | |
| STRING | 3702.AT4G35350.1-P | |
| MEROPS | C01.065 | |
| PaxDb | O65493 | |
| PRIDE | O65493 | |
| EnsemblPlants | AT4G35350.1 | |
| GeneID | 829688 | |
| KEGG | ath:AT4G35350 | |
| GeneFarm | 5033 | |
| TAIR | AT4G35350 | |
| eggNOG | COG4870 | |
| HOGENOM | HOG000230773 | |
| InParanoid | O65493 | |
| KO | K16290 | |
| OMA | PSANFRY | |
| PhylomeDB | O65493 | |
| BioCyc | ARA:AT4G35350-MONOMER ARA:GQT-1554-MONOMER | |
| Reactome | REACT_187608 REACT_187658 REACT_270607 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | O65493 | |
| Genevestigator | O65493 | |
| GO | GO:0005634 GO:0000325 GO:0005886 GO:0008234 GO:0010623 | |
| InterPro | IPR000169 IPR025660 IPR013128 IPR000668 IPR013201 | |
| PANTHER | PTHR12411 | |
| Pfam | PF08246 PF00112 | |
| PRINTS | PR00705 | |
| SMART | SM00848 SM00645 | |
| PROSITE | PS00139 PS00639 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010623 |
programmed cell death involved in cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0000325 |
plant-type vacuole |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051603 |
proteolysis involved in cellular protein catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107341 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005764 |
lysosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0013770 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0034229 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004197 |
cysteine-type endopeptidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0013770 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006508 |
proteolysis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008234 |
cysteine-type peptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005773 |
vacuole |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008234 |
cysteine-type peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Avci, U et al. (2008) Cysteine proteases XCP1 and XCP2 aid micro-autolysis within the intact central vacuole during xylogenesis in Arabidopsis roots. Plant J. 56 303-15 PubMed GONUTS page
- ↑ Bae, MS et al. (2003) Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Plant J. 36 652-63 PubMed GONUTS page
- ↑ Funk, V et al. (2002) The Arabidopsis xylem peptidase XCP1 is a tracheary element vacuolar protein that may be a papain ortholog. Plant Physiol. 128 84-94 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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