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ARATH:TI10A
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | TIFY10A (synonyms: JAZ1) | |
| Protein Name(s) | Protein TIFY 10A
Jasmonate ZIM domain-containing protein 1 | |
| External Links | ||
| UniProt | Q9LMA8 | |
| EMBL | AC069143 CP002684 AF332421 AY039894 AY065146 AY081738 AY081633 AY058863 AY087830 | |
| PIR | C86325 | |
| RefSeq | NP_564075.1 | |
| UniGene | At.22658 | |
| PDB | 3OGK 3OGL 3OGM | |
| PDBsum | 3OGK 3OGL 3OGM | |
| ProteinModelPortal | Q9LMA8 | |
| BioGrid | 23740 | |
| DIP | DIP-39129N | |
| IntAct | Q9LMA8 | |
| PaxDb | Q9LMA8 | |
| PRIDE | Q9LMA8 | |
| EnsemblPlants | AT1G19180.1 | |
| GeneID | 838501 | |
| KEGG | ath:AT1G19180 | |
| TAIR | AT1G19180 | |
| eggNOG | NOG273955 | |
| HOGENOM | HOG000239787 | |
| InParanoid | Q9LMA8 | |
| KO | K13464 | |
| OMA | SSMECSE | |
| PhylomeDB | Q9LMA8 | |
| EvolutionaryTrace | Q9LMA8 | |
| PRO | PR:Q9LMA8 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9LMA8 | |
| Genevestigator | Q9LMA8 | |
| GO | GO:0005634 GO:0042742 GO:0009908 GO:0009867 GO:0009555 GO:0006355 GO:0009753 GO:0006351 | |
| InterPro | IPR018467 IPR010399 | |
| Pfam | PF09425 PF06200 | |
| SMART | SM00979 | |
| PROSITE | PS51320 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:1900067 |
regulation of cellular response to alkaline pH |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042742 |
defense response to bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009908 |
flower development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009867 |
jasmonic acid mediated signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009753 |
response to jasmonic acid |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009555 |
pollen development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000022 |
regulation of jasmonic acid mediated signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002100906 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0031347 |
regulation of defense response |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002100906 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009611 |
response to wounding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002100906 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002100906 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
| GO:1900067 |
regulation of cellular response to alkaline pH |
ECO:0000315 |
P |
Figure 3, panels C and D show decreased rates of germination in TIFY10a knockouts at pH=8.5 compared to wild-type. Figure 4, panel C shows increased growth in overexpressed TIFY10a plants compared to wild-type when exposed to high pH. |
complete | |||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Zhu, D et al. (2014) The positive regulatory roles of the TIFY10 proteins in plant responses to alkaline stress. PLoS ONE 9 e111984 PubMed GONUTS page
- ↑ Melotto, M et al. (2008) A critical role of two positively charged amino acids in the Jas motif of Arabidopsis JAZ proteins in mediating coronatine- and jasmonoyl isoleucine-dependent interactions with the COI1 F-box protein. Plant J. 55 979-88 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 Thines, B et al. (2007) JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling. Nature 448 661-5 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
