ARATH:THF1

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	THF1
Protein Name(s)	Protein THYLAKOID FORMATION 1, chloroplastic
External Links
UniProt	Q9SKT0
EMBL	AY899908 AC006234 CP002685 AY062799 AY081596 AY087394
PIR	F84594
RefSeq	NP_565491.1
UniGene	At.46381 At.48498
ProteinModelPortal	Q9SKT0
BioGrid	1976
IntAct	Q9SKT0
PaxDb	Q9SKT0
PRIDE	Q9SKT0
EnsemblPlants	AT2G20890.1
GeneID	816623
KEGG	ath:AT2G20890
TAIR	AT2G20890
eggNOG	NOG08111
HOGENOM	HOG000232762
InParanoid	Q9SKT0
OMA	CASLNIN
PhylomeDB	Q9SKT0
Proteomes	UP000006548
Genevestigator	Q9SKT0
GO	GO:0009507 GO:0009941 GO:0009707 GO:0009570 GO:0009534 GO:0009535 GO:0016021 GO:0009523 GO:0009528 GO:0009527 GO:0009532 GO:0010319 GO:0007186 GO:0010207 GO:0045037 GO:0045038 GO:0010182 GO:0010027
HAMAP	MF_01843
InterPro	IPR017499
Pfam	PF11264
TIGRFAMs	TIGR03060

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0015996	chlorophyll catabolic process	PMID:23671330^[1]	ECO:0000315			P	Figure 1	complete CACAO 8442
involved_in	GO:0015996	chlorophyll catabolic process	PMID:23671330^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:2000070	regulation of response to water deprivation	PMID:27744298^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:1903426	regulation of reactive oxygen species biosynthetic process	PMID:27744298^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:1902458	positive regulation of stomatal opening	PMID:27744298^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045038	protein import into chloroplast thylakoid membrane	PMID:15516501^[3]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045037	protein import into chloroplast stroma	PMID:15516501^[3]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0010319	stromule	PMID:16582010^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0010319	stromule	PMID:15516501^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0010182	sugar mediated signaling pathway	PMID:16582010^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010027	thylakoid membrane organization	PMID:15516501^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0009941	chloroplast envelope	PMID:20061580^[5]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009941	chloroplast envelope	PMID:12938931^[6]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009570	chloroplast stroma	PMID:18633119^[7]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009570	chloroplast stroma	PMID:16207701^[8]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009535	chloroplast thylakoid membrane	PMID:15322131^[9]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009534	chloroplast thylakoid	PMID:20061580^[5]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009534	chloroplast thylakoid	PMID:16155179^[10]	ECO:0000250	sequence similarity evidence used in manual assertion		C	Seeded From UniProt	Missing: with/from
part_of	GO:0009532	plastid stroma	PMID:16582010^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009528	plastid inner membrane	PMID:16582010^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009527	plastid outer membrane	PMID:16582010^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009507	chloroplast	PMID:18431481^[11]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009507	chloroplast	PMID:15516501^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0009507	chloroplast	PMID:15028209^[12]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0045038	protein import into chloroplast thylakoid membrane	PMID:21873635^[13]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002164861 TAIR:locus:2051353	P	Seeded From UniProt	complete
involved_in	GO:0045037	protein import into chloroplast stroma	PMID:21873635^[13]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002164861 TAIR:locus:2051353	P	Seeded From UniProt	complete
involved_in	GO:0010027	thylakoid membrane organization	PMID:21873635^[13]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002164861 TAIR:locus:2051353	P	Seeded From UniProt	complete
part_of	GO:0009534	chloroplast thylakoid	PMID:21873635^[13]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002164861 TAIR:locus:2051353	C	Seeded From UniProt	complete
involved_in	GO:0010207	photosystem II assembly	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017499	P	Seeded From UniProt	complete
involved_in	GO:0015979	photosynthesis	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017499	P	Seeded From UniProt	complete
involved_in	GO:0010207	photosystem II assembly	PMID:16155179^[10]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0009507	chloroplast	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0150	C	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0812	C	Seeded From UniProt	complete
part_of	GO:0009536	plastid	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0934	C	Seeded From UniProt	complete
part_of	GO:0009527	plastid outer membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1002	C	Seeded From UniProt	complete
part_of	GO:0009570	chloroplast stroma	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0055	C	Seeded From UniProt	complete
part_of	GO:0009707	chloroplast outer membrane	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0054	C	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Huang, W et al. (2013) Arabidopsis thylakoid formation 1 is a critical regulator for dynamics of PSII-LHCII complexes in leaf senescence and excess light. Mol Plant 6 1673-91 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 Wang, Z et al. (2016) Two Chloroplast Proteins Suppress Drought Resistance by Affecting ROS Production in Guard Cells. Plant Physiol. 172 2491-2503 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 Wang, Q et al. (2004) Deletion of the chloroplast-localized Thylakoid formation1 gene product in Arabidopsis leads to deficient thylakoid formation and variegated leaves. Plant Physiol. 136 3594-604 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 Huang, J et al. (2006) The plastid protein THYLAKOID FORMATION1 and the plasma membrane G-protein GPA1 interact in a novel sugar-signaling mechanism in Arabidopsis. Plant Cell 18 1226-38 PubMed GONUTS page
↑ ^5.0 ^5.1 Ferro, M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol. Cell Proteomics 9 1063-84 PubMed GONUTS page
↑ Froehlich, JE et al. () Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J. Proteome Res. 2 413-25 PubMed GONUTS page
↑ Rutschow, H et al. (2008) Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol. 148 156-75 PubMed GONUTS page
↑ Peltier, JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol. Cell Proteomics 5 114-33 PubMed GONUTS page
↑ Peltier, JB et al. (2004) New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J. Biol. Chem. 279 49367-83 PubMed GONUTS page
↑ ^10.0 ^10.1 Keren, N et al. (2005) Psb29, a conserved 22-kD protein, functions in the biogenesis of Photosystem II complexes in Synechocystis and Arabidopsis. Plant Cell 17 2768-81 PubMed GONUTS page
↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
↑ Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page
↑ ^13.0 ^13.1 ^13.2 ^13.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:23671330-1] 1.0 ^1.1 Huang, W et al. (2013) Arabidopsis thylakoid formation 1 is a critical regulator for dynamics of PSII-LHCII complexes in leaf senescence and excess light. Mol Plant 6 1673-91 PubMed GONUTS page

[PMID:27744298-2] 2.0 ^2.1 ^2.2 Wang, Z et al. (2016) Two Chloroplast Proteins Suppress Drought Resistance by Affecting ROS Production in Guard Cells. Plant Physiol. 172 2491-2503 PubMed GONUTS page

[PMID:15516501-3] 3.0 ^3.1 ^3.2 ^3.3 ^3.4 Wang, Q et al. (2004) Deletion of the chloroplast-localized Thylakoid formation1 gene product in Arabidopsis leads to deficient thylakoid formation and variegated leaves. Plant Physiol. 136 3594-604 PubMed GONUTS page

[PMID:16582010-4] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 Huang, J et al. (2006) The plastid protein THYLAKOID FORMATION1 and the plasma membrane G-protein GPA1 interact in a novel sugar-signaling mechanism in Arabidopsis. Plant Cell 18 1226-38 PubMed GONUTS page

[PMID:20061580-5] 5.0 ^5.1 Ferro, M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol. Cell Proteomics 9 1063-84 PubMed GONUTS page

[PMID:12938931-6] Froehlich, JE et al. () Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J. Proteome Res. 2 413-25 PubMed GONUTS page

[PMID:18633119-7] Rutschow, H et al. (2008) Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol. 148 156-75 PubMed GONUTS page

[PMID:16207701-8] Peltier, JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol. Cell Proteomics 5 114-33 PubMed GONUTS page

[PMID:15322131-9] Peltier, JB et al. (2004) New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J. Biol. Chem. 279 49367-83 PubMed GONUTS page

[PMID:16155179-10] 10.0 ^10.1 Keren, N et al. (2005) Psb29, a conserved 22-kD protein, functions in the biogenesis of Photosystem II complexes in Synechocystis and Arabidopsis. Plant Cell 17 2768-81 PubMed GONUTS page

[PMID:18431481-11] Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page

[PMID:15028209-12] Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page

[PMID:21873635-13] 13.0 ^13.1 ^13.2 ^13.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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ARATH:THF1

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