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ARATH:SNL1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | SNL1 | |
| Protein Name(s) | Paired amphipathic helix protein Sin3-like 1 | |
| External Links | ||
| UniProt | Q9SRH9 | |
| EMBL | AC010676 CP002686 | |
| RefSeq | NP_186781.4 | |
| UniGene | At.41297 | |
| ProteinModelPortal | Q9SRH9 | |
| SMR | Q9SRH9 | |
| BioGrid | 6598 | |
| IntAct | Q9SRH9 | |
| STRING | 3702.AT3G01320.1-P | |
| PaxDb | Q9SRH9 | |
| PRIDE | Q9SRH9 | |
| EnsemblPlants | AT3G01320.1 | |
| GeneID | 821265 | |
| KEGG | ath:AT3G01320 | |
| TAIR | AT3G01320 | |
| eggNOG | COG5602 | |
| HOGENOM | HOG000030343 | |
| InParanoid | Q9SRH9 | |
| KO | K11644 | |
| OMA | DERSSAM | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9SRH9 | |
| Genevestigator | Q9SRH9 | |
| GO | GO:0005634 GO:0045892 GO:0006351 | |
| Gene3D | 1.20.1160.11 | |
| InterPro | IPR013194 IPR003822 | |
| Pfam | PF02671 PF08295 | |
| SMART | SM00761 | |
| SUPFAM | SSF47762 | |
| PROSITE | PS51477 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016575 |
histone deacetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000269659 |
P |
Seeded From UniProt |
complete | ||
|
contributes_to |
GO:0004407 |
histone deacetylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000269659 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107157 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0000785 |
chromatin |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000269659 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107157 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Bowen, AJ et al. (2010) PAH-domain-specific interactions of the Arabidopsis transcription coregulator SIN3-LIKE1 (SNL1) with telomere-binding protein 1 and ALWAYS EARLY2 Myb-DNA binding factors. J. Mol. Biol. 395 937-49 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
