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ARATH:RPM1
Contents
Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
Gene Name(s) | RPM1 (synonyms: RPS3) | |
Protein Name(s) | Disease resistance protein RPM1
Resistance to Pseudomonas syringae protein 3 | |
External Links | ||
UniProt | Q39214 | |
EMBL | X87851 AC016827 CP002686 | |
PIR | A57072 | |
RefSeq | NP_187360.1 | |
UniGene | At.40415 | |
ProteinModelPortal | Q39214 | |
SMR | Q39214 | |
BioGrid | 5224 | |
MINT | MINT-8060368 | |
PaxDb | Q39214 | |
PRIDE | Q39214 | |
EnsemblPlants | AT3G07040.1 | |
GeneID | 819889 | |
KEGG | ath:AT3G07040 | |
TAIR | AT3G07040 | |
eggNOG | COG4886 | |
HOGENOM | HOG000237754 | |
InParanoid | Q39214 | |
KO | K13457 | |
OMA | WREISIA | |
PhylomeDB | Q39214 | |
Proteomes | UP000006548 | |
ExpressionAtlas | Q39214 | |
Genevestigator | Q39214 | |
GO | GO:0012505 GO:0005886 GO:0043531 GO:0005524 GO:0000166 GO:0009626 | |
Gene3D | 3.40.50.300 | |
InterPro | IPR001611 IPR002182 IPR027417 | |
Pfam | PF00560 PF00931 | |
SUPFAM | SSF52540 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009814 |
defense response, incompatible interaction |
ECO:0000315 |
P |
Fig. 2B. Complementation of rpm1 mutants with cosmid 1FB elicited hypersensitive response and inhibits growth of P. syringae DC3000, similar to the wild type controls. Empty vector mutants inoculated were unable to inhibit pathogen growth. |
complete | |||||
GO:0031234 |
extrinsic component of cytoplasmic side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Fig. 2A shows the protein is present in the total and microsomal membrane fractions, but not in the soluble fraction; the protein is likely associated with the membrane. Fig. 2B shows that treatments with detergent (to solubilize the microsomal membrane), sodium carbonate or urea (which do little damage to the lipid bilayer), and even extraction buffer (due to the physical force of resuspension) can release the protein from the membrane; the protein is likely not transmembrane. Fig. 2D shows that RPM1∷MYC, like RD28, is enriched in the plasma membrane vesicles; the protein is likely associated with the plasma membrane. |
complete | ||||
involved_in |
GO:0009626 |
plant-type hypersensitive response |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
enables |
GO:0043531 |
ADP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009626 |
plant-type hypersensitive response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0012505 |
endomembrane system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Grant, MR et al. (1995) Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance. Science 269 843-6 PubMed GONUTS page
- ↑ 2.0 2.1 Boyes, DC et al. (1998) The Arabidopsis thaliana RPM1 disease resistance gene product is a peripheral plasma membrane protein that is degraded coincident with the hypersensitive response. Proc. Natl. Acad. Sci. U.S.A. 95 15849-54 PubMed GONUTS page
- ↑ Gopalan, S et al. (1996) Expression of the Pseudomonas syringae avirulence protein AvrB in plant cells alleviates its dependence on the hypersensitive response and pathogenicity (Hrp) secretion system in eliciting genotype-specific hypersensitive cell death. Plant Cell 8 1095-105 PubMed GONUTS page
- ↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page