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ARATH:RL242
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | RPL24B (synonyms: STV1) | |
| Protein Name(s) | 60S ribosomal protein L24-2
Protein SHORT VALVE 1 | |
| External Links | ||
| UniProt | P38666 | |
| EMBL | AB199790 AL132969 CP002686 AY058129 AY093180 BT006545 Z26463 AK221088 | |
| PIR | T47559 | |
| RefSeq | NP_190870.1 | |
| UniGene | At.22369 At.32892 At.66502 At.71926 | |
| ProteinModelPortal | P38666 | |
| SMR | P38666 | |
| BioGrid | 9785 | |
| IntAct | P38666 | |
| PaxDb | P38666 | |
| PRIDE | P38666 | |
| EnsemblPlants | AT3G53020.1 | |
| GeneID | 824468 | |
| KEGG | ath:AT3G53020 | |
| GeneFarm | 255 | |
| TAIR | AT3G53020 | |
| eggNOG | COG2075 | |
| HOGENOM | HOG000184343 | |
| InParanoid | P38666 | |
| KO | K02896 | |
| OMA | NGKCESA | |
| PhylomeDB | P38666 | |
| Reactome | REACT_187631 REACT_187829 REACT_190931 REACT_232663 REACT_238761 REACT_240283 REACT_248654 REACT_262398 | |
| PRO | PR:P38666 | |
| Proteomes | UP000006548 | |
| Genevestigator | P38666 | |
| GO | GO:0022625 GO:0005730 GO:0009734 GO:0048467 | |
| Gene3D | 2.30.170.20 | |
| InterPro | IPR023442 IPR023441 IPR000988 | |
| PANTHER | PTHR10792 | |
| Pfam | PF01246 | |
| PROSITE | PS01073 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048467 |
gynoecium development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0022625 |
cytosolic large ribosomal subunit |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009734 |
auxin-activated signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
NOT|part_of |
GO:0005829 |
cytosol |
ECO:0000245 |
automatically integrated combinatorial evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1902626 |
assembly of large subunit precursor of preribosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000846433 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0022625 |
cytosolic large ribosomal subunit |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000846433 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006412 |
translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1915443 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000846433 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000846433 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000027 |
ribosomal large subunit assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1915443 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Carroll, AJ et al. (2008) Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol. Cell Proteomics 7 347-69 PubMed GONUTS page
- ↑ 2.0 2.1 Nishimura, T et al. (2005) The Arabidopsis STV1 protein, responsible for translation reinitiation, is required for auxin-mediated gynoecium patterning. Plant Cell 17 2940-53 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
- ↑ Pendle, AF et al. (2005) Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Mol. Biol. Cell 16 260-9 PubMed GONUTS page
- ↑ Reichel, M et al. (2016) In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell 28 2435-2452 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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