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ARATH:RBOHD

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Species (Taxon ID) Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s) RBOHD
Protein Name(s) Respiratory burst oxidase homolog protein D

NADPH oxidase RBOHD AtRBOHD

External Links
UniProt Q9FIJ0
EMBL AF055357
AB016886
CP002688
AF424625
BT002651
PIR T51804
RefSeq NP_199602.1
UniGene At.23270
ProteinModelPortal Q9FIJ0
SMR Q9FIJ0
PeroxiBase 3286
PaxDb Q9FIJ0
PRIDE Q9FIJ0
EnsemblPlants AT5G47910.1
GeneID 834842
KEGG ath:AT5G47910
TAIR AT5G47910
eggNOG COG4097
HOGENOM HOG000216670
InParanoid Q9FIJ0
KO K13447
OMA CFVIVYA
PhylomeDB Q9FIJ0
BioCyc ARA:AT5G47910-MONOMER
Proteomes UP000006548
Genevestigator Q9FIJ0
GO GO:0005794
GO:0016021
GO:0005886
GO:0005509
GO:0016174
GO:0004601
GO:0033500
GO:0050832
GO:0043069
GO:0007231
GO:0072593
GO:0009408
GO:0009611
Gene3D 1.10.238.10
InterPro IPR000778
IPR011992
IPR018247
IPR002048
IPR013112
IPR017927
IPR013130
IPR013121
IPR013623
IPR017938
Pfam PF08022
PF01794
PF08030
PF08414
PRINTS PR00466
SUPFAM SSF63380
PROSITE PS00018
PS50222
PS51384

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0042542

response to hydrogen peroxide

PMID:23125844[1]

ECO:0000315

P

Table 2. shows ROS-responsive genes (58 in total) the expression of which was enhanced by more than 3-fold in GO plants 0.5 h after shifting plants grown at high CO2 concentration (3000 ppm) to ambient CO2 concentration (380 ppm).

complete

involved_in

GO:0072593

reactive oxygen species metabolic process

PMID:26704641[2]

ECO:0000316

genetic interaction evidence used in manual assertion

AGI_LocusCode:AT2G40220
AGI_LocusCode:At2g26670

P

Seeded From UniProt

complete

involved_in

GO:0072593

reactive oxygen species metabolic process

PMID:11756663[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0050832

defense response to fungus

PMID:19726575[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043069

negative regulation of programmed cell death

PMID:16170317[5]

ECO:0000316

genetic interaction evidence used in manual assertion

AGI_LocusCode:AT4G20380

P

Seeded From UniProt

complete

involved_in

GO:0033500

carbohydrate homeostasis

PMID:22422940[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0016174

NAD(P)H oxidase activity

PMID:19726575[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0009611

response to wounding

PMID:21419340[7]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009408

response to heat

PMID:15923322[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007231

osmosensory signaling pathway

PMID:22422940[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:22923678[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:17317660[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

PMID:22430844[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0283531
MGI:MGI:1354184
MGI:MGI:2450016
MGI:MGI:2681162
PANTHER:PTN001735877
PomBase:SPBC1683.09c
RGD:620600
SGD:S000003128
SGD:S000004037
SGD:S000005512
TAIR:locus:2017789
TAIR:locus:2024603
TAIR:locus:2025351
TAIR:locus:2025366
TAIR:locus:2157032
TAIR:locus:2157348
TAIR:locus:2157697
TAIR:locus:2160917
TAIR:locus:2178677
TAIR:locus:2178687
UniProtKB:P04839
UniProtKB:Q96PH1
UniProtKB:Q9NPH5
UniProtKB:Q9NRD8
UniProtKB:Q9SBI0
UniProtKB:Q9Y5S8
WB:WBGene00000253
dictyBase:DDB_G0287101
dictyBase:DDB_G0289653

P

Seeded From UniProt

complete

enables

GO:0016174

NAD(P)H oxidase activity

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000944270
TAIR:locus:2024603
TAIR:locus:2157348
TAIR:locus:2160917
UniProtKB:Q9SBI0

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2139422
MGI:MGI:2681162
MGI:MGI:88574
PANTHER:PTN001735877
RGD:620574
RGD:620598
RGD:620600
SGD:S000005512
TAIR:locus:2024603
TAIR:locus:2025351
TAIR:locus:2157027
TAIR:locus:2157348
TAIR:locus:2157697
TAIR:locus:2160917
UniProtKB:O81209
UniProtKB:P04839
UniProtKB:Q9Y5S8
WB:WBGene00000253

C

Seeded From UniProt

complete

involved_in

GO:0098869

cellular oxidant detoxification

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004601

P

Seeded From UniProt

complete

involved_in

GO:0098869

cellular oxidant detoxification

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004601

P

Seeded From UniProt

complete

enables

GO:0004601

peroxidase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013623

F

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002048

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000778

C

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000778
InterPro:IPR013112
InterPro:IPR013121
InterPro:IPR017927

F

Seeded From UniProt

complete

enables

GO:0050664

oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013623

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000778
InterPro:IPR013112
InterPro:IPR013121
InterPro:IPR013623
InterPro:IPR017927

P

Seeded From UniProt

complete

involved_in

GO:0072593

reactive oxygen species metabolic process

PMID:15705948[13]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0016174

NAD(P)H oxidase activity

PMID:15608336[14]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006952

defense response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0611

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

enables

GO:0004601

peroxidase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0575

F

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Balazadeh, S et al. (2012) Expression of ROS-responsive genes and transcription factors after metabolic formation of H(2)O(2) in chloroplasts. Front Plant Sci 3 234 PubMed GONUTS page
  2. ↑ Xie, Y et al. (2016) Arabidopsis HY1-Modulated Stomatal Movement: An Integrative Hub Is Functionally Associated with ABI4 in Dehydration-Induced ABA Responsiveness. Plant Physiol. 170 1699-713 PubMed GONUTS page
  3. ↑ Torres, MA et al. (2002) Arabidopsis gp91phox homologues AtrbohD and AtrbohF are required for accumulation of reactive oxygen intermediates in the plant defense response. Proc. Natl. Acad. Sci. U.S.A. 99 517-22 PubMed GONUTS page
  4. ↑ 4.0 4.1 Pogány, M et al. (2009) Dual roles of reactive oxygen species and NADPH oxidase RBOHD in an Arabidopsis-Alternaria pathosystem. Plant Physiol. 151 1459-75 PubMed GONUTS page
  5. ↑ Torres, MA et al. (2005) Pathogen-induced, NADPH oxidase-derived reactive oxygen intermediates suppress spread of cell death in Arabidopsis thaliana. Nat. Genet. 37 1130-4 PubMed GONUTS page
  6. ↑ 6.0 6.1 Wormit, A et al. (2012) Osmosensitive changes of carbohydrate metabolism in response to cellulose biosynthesis inhibition. Plant Physiol. 159 105-17 PubMed GONUTS page
  7. ↑ Takahashi, F et al. (2011) Calmodulin-dependent activation of MAP kinase for ROS homeostasis in Arabidopsis. Mol. Cell 41 649-60 PubMed GONUTS page
  8. ↑ Larkindale, J et al. (2005) Heat stress phenotypes of Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermotolerance. Plant Physiol. 138 882-97 PubMed GONUTS page
  9. ↑ Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page
  10. ↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
  11. ↑ Parsons, HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol. 159 12-26 PubMed GONUTS page
  12. ↑ 12.0 12.1 12.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  13. ↑ Joo, JH et al. (2005) Different signaling and cell death roles of heterotrimeric G protein alpha and beta subunits in the Arabidopsis oxidative stress response to ozone. Plant Cell 17 957-70 PubMed GONUTS page
  14. ↑ Davletova, S et al. (2005) Cytosolic ascorbate peroxidase 1 is a central component of the reactive oxygen gene network of Arabidopsis. Plant Cell 17 268-81 PubMed GONUTS page
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