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ARATH:PIN6
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | PIN6 | |
| Protein Name(s) | Probable auxin efflux carrier component 6
AtPIN6 | |
| External Links | ||
| UniProt | Q9SQH6 | |
| EMBL | AF087819 AC002291 CP002684 | |
| PIR | A96800 | |
| RefSeq | NP_177836.1 | |
| UniGene | At.11574 | |
| ProteinModelPortal | Q9SQH6 | |
| PaxDb | Q9SQH6 | |
| PRIDE | Q9SQH6 | |
| EnsemblPlants | AT1G77110.1 | |
| GeneID | 844046 | |
| KEGG | ath:AT1G77110 | |
| GeneFarm | 3027 | |
| TAIR | AT1G77110 | |
| eggNOG | NOG272808 | |
| HOGENOM | HOG000238224 | |
| InParanoid | Q9SQH6 | |
| KO | K13947 | |
| OMA | HAAKDIN | |
| PhylomeDB | Q9SQH6 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9SQH6 | |
| GO | GO:0016021 GO:0005886 GO:0009926 GO:0009734 GO:0055085 | |
| InterPro | IPR004776 IPR014024 | |
| Pfam | PF03547 | |
| TIGRFAMs | TIGR00946 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:1901332 |
negative regulation of lateral root development |
ECO:0000315 |
P |
Figure 2C and D- lateral root development is altered depending on PIN6 expression. |
complete | |||||
| GO:0048767 |
root hair elongation |
ECO:0000315 |
P |
Figure 4G&H- overexpression of PIN6 caused no root hair formation. |
complete | |||||
| GO:0010105 |
negative regulation of ethylene-activated signaling pathway |
ECO:0000315 |
P |
Figure 5 |
complete | |||||
| GO:0009926 |
auxin polar transport |
ECO:0000315 |
P |
Figure 6A |
complete | |||||
| GO:0010540 |
basipetal auxin transport |
ECO:0000315 |
P |
Figure 6B |
complete | |||||
|
involved_in |
GO:1901332 |
negative regulation of lateral root development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048767 |
root hair elongation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010540 |
basipetal auxin transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009926 |
auxin polar transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010105 |
negative regulation of ethylene-activated signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009926 |
auxin polar transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010329 |
auxin efflux transmembrane transporter activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010315 |
auxin efflux |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010252 |
auxin homeostasis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009926 |
auxin polar transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001589272 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009734 |
auxin-activated signaling pathway |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Cazzonelli, CI et al. (2013) Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development. PLoS ONE 8 e70069 PubMed GONUTS page
- ↑ Petrásek, J et al. (2006) PIN proteins perform a rate-limiting function in cellular auxin efflux. Science 312 914-8 PubMed GONUTS page
- ↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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