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ARATH:NFXL1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | NFXL1 | |
| Protein Name(s) | NF-X1-type zinc finger protein NFXL1
AtNFXL1 | |
| External Links | ||
| UniProt | Q9SY59 | |
| EMBL | AC005489 CP002684 | |
| PIR | D86236 | |
| RefSeq | NP_172488.1 | |
| UniGene | At.25390 | |
| ProteinModelPortal | Q9SY59 | |
| STRING | 3702.AT1G10170.1-P | |
| PaxDb | Q9SY59 | |
| PRIDE | Q9SY59 | |
| EnsemblPlants | AT1G10170.1 | |
| GeneID | 837555 | |
| KEGG | ath:AT1G10170 | |
| TAIR | AT1G10170 | |
| eggNOG | NOG12793 | |
| HOGENOM | HOG000030687 | |
| InParanoid | Q9SY59 | |
| KO | K12236 | |
| OMA | DIRYLCF | |
| PhylomeDB | Q9SY59 | |
| UniPathway | UPA00143 | |
| PRO | PR:Q9SY59 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9SY59 | |
| GO | GO:0005634 GO:0003677 GO:0016874 GO:0003700 GO:0008270 GO:0042742 GO:0016567 GO:0010310 GO:0009642 GO:0010188 GO:0009651 GO:0009697 GO:0006351 | |
| InterPro | IPR019786 IPR000967 IPR019787 IPR001841 | |
| Pfam | PF01422 | |
| SMART | SM00184 SM00438 | |
| PROSITE | PS01359 PS50016 PS50089 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010310 |
regulation of hydrogen peroxide metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042742 |
defense response to bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010188 |
response to microbial phytotoxin |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009697 |
salicylic acid biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009651 |
response to salt stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009642 |
response to light intensity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0001978 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000270822 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1921414 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Lisso, J et al. (2006) The AtNFXL1 gene encodes a NF-X1 type zinc finger protein required for growth under salt stress. FEBS Lett. 580 4851-6 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Asano, T et al. (2008) AtNFXL1, an Arabidopsis homologue of the human transcription factor NF-X1, functions as a negative regulator of the trichothecene phytotoxin-induced defense response. Plant J. 53 450-64 PubMed GONUTS page
- ↑ Reichel, M et al. (2016) In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell 28 2435-2452 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
d
r
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0010310 ! regulation of hydrogen peroxide metabolic process
- GO:0009642 ! response to light intensity
- GO:0009651 ! response to salt stress
- GO:0010188 ! response to microbial phytotoxin
- GO:0000977 ! RNA polymerase II transcription regulatory region sequence-specific DNA binding
- rosids
