ARATH:MYB96

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	MYB96 (ECO:0000303 with PMID:11597504^[1]) (synonyms: MYBCOV1 (ECO:0000312 with EMBL:AED97611.1))
Protein Name(s)	Transcription factor MYB96 (ECO:0000303 with PMID:11597504^[1]) Myb-related protein 96 (ECO:0000303 with PMID:11597504^[1]) AtMYB96 (ECO:0000303 with PMID:11597504^[1])
External Links
UniProt	Q24JK1
EMBL	AF176001 AY519645 AB015469 CP002688 CP002688 BT024888 AK228977 AJ011669
PIR	T52590
RefSeq	NP_201053.2
UniGene	At.9303
SMR	Q24JK1
STRING	3702.AT5G62470.2
PaxDb	Q24JK1
EnsemblPlants	AT5G62470.2
GeneID	836367
Gramene	AT5G62470.2
KEGG	ath:AT5G62470
Araport	AT5G62470
TAIR	locus:2154119
eggNOG	KOG0048 COG5147
HOGENOM	HOG000237600
KO	K09422
OMA	DEQSHEM
OrthoDB	EOG09360KVW
Proteomes	UP000006548
GO	GO:0005634 GO:0003700 GO:0000981 GO:0043565 GO:0001135 GO:0044212 GO:0030154 GO:0045893 GO:1904278 GO:0010115 GO:0009787 GO:0010468 GO:2000033 GO:0006357 GO:0006355 GO:0009737 GO:0009409 GO:0009751 GO:0009651 GO:0009414
CDD	cd00167
InterPro	IPR009057 IPR017930 IPR001005
Pfam	PF00249
SMART	SM00717
SUPFAM	SSF46689
PROSITE	PS51294

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:2000033	regulation of seed dormancy process	PMID:25616734^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009409	response to cold	PMID:25912720^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010115	regulation of abscisic acid biosynthetic process	PMID:25616734^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009787	regulation of abscisic acid-activated signaling pathway	PMID:19625633^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	PMID:21398568^[5]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	PMID:21398568^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:1904278	positive regulation of wax biosynthetic process	PMID:21398568^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010025	wax biosynthetic process	PMID:21398568^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010468	regulation of gene expression	PMID:19625633^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009751	response to salicylic acid	PMID:16463103^[6]	ECO:0000270	expression pattern evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009737	response to abscisic acid	PMID:16463103^[6]	ECO:0000270	expression pattern evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009651	response to salt stress	PMID:16463103^[6]	ECO:0000270	expression pattern evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009414	response to water deprivation	PMID:19625633^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:19625633^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	PMID:11118137^[7]	ECO:0000250	sequence similarity evidence used in manual assertion		F	Seeded From UniProt	Missing: with/from
enables	GO:0044212	transcription regulatory region DNA binding	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000067606 TAIR:locus:2139144 UniProtKB:Q9ZSI4	F	Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000067606 TAIR:locus:2009452 TAIR:locus:2032860 TAIR:locus:2079182 TAIR:locus:2103459 TAIR:locus:2152830 TAIR:locus:2160339 TAIR:locus:2161820 TAIR:locus:2163233 TAIR:locus:2173562 TAIR:locus:2182275 UniProtKB:Q24JK1 UniProtKB:Q9LXF1	F	Seeded From UniProt	complete
involved_in	GO:0030154	cell differentiation	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000067606 TAIR:locus:2174557	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000067606 TAIR:locus:2005503 TAIR:locus:2011786 TAIR:locus:2023951 TAIR:locus:2032860 TAIR:locus:2035015 TAIR:locus:2035287 TAIR:locus:2042526 TAIR:locus:2059883 TAIR:locus:2060241 TAIR:locus:2062040 TAIR:locus:2079182 TAIR:locus:2087690 TAIR:locus:2088187 TAIR:locus:2088957 TAIR:locus:2090764 TAIR:locus:2098906 TAIR:locus:2103386 TAIR:locus:2116447 TAIR:locus:2131844 TAIR:locus:2132584 TAIR:locus:2139144 TAIR:locus:2151938 TAIR:locus:2161820 TAIR:locus:2163233 TAIR:locus:2169538 TAIR:locus:2170553 TAIR:locus:2173562 TAIR:locus:2174195 TAIR:locus:2182275 TAIR:locus:2185470 TAIR:locus:2195528 TAIR:locus:2205283 TAIR:locus:2207330 TAIR:locus:4515102929 TAIR:locus:504955052 UniProtKB:Q24JK1	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009057	F	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	PMID:11118137^[7]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
involved_in	GO:0006952	defense response	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0611	P	Seeded From UniProt	complete
involved_in	GO:0009738	abscisic acid-activated signaling pathway	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0938	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Stracke, R et al. (2001) The R2R3-MYB gene family in Arabidopsis thaliana. Curr. Opin. Plant Biol. 4 447-56 PubMed GONUTS page
↑ ^2.0 ^2.1 Lee, HG et al. (2015) The Arabidopsis MYB96 transcription factor plays a role in seed dormancy. Plant Mol. Biol. 87 371-81 PubMed GONUTS page
↑ Lee, HG & Seo, PJ (2015) The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis. Plant J. 82 962-77 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 Seo, PJ et al. (2009) The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis. Plant Physiol. 151 275-89 PubMed GONUTS page
↑ ^5.0 ^5.1 ^5.2 ^5.3 Seo, PJ et al. (2011) The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis. Plant Cell 23 1138-52 PubMed GONUTS page
↑ ^6.0 ^6.1 ^6.2 Yanhui, C et al. (2006) The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. Plant Mol. Biol. 60 107-24 PubMed GONUTS page
↑ ^7.0 ^7.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
↑ ^8.0 ^8.1 ^8.2 ^8.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:11597504-1] 1.0 ^1.1 ^1.2 ^1.3 Stracke, R et al. (2001) The R2R3-MYB gene family in Arabidopsis thaliana. Curr. Opin. Plant Biol. 4 447-56 PubMed GONUTS page

[PMID:25616734-2] 2.0 ^2.1 Lee, HG et al. (2015) The Arabidopsis MYB96 transcription factor plays a role in seed dormancy. Plant Mol. Biol. 87 371-81 PubMed GONUTS page

[PMID:25912720-3] Lee, HG & Seo, PJ (2015) The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis. Plant J. 82 962-77 PubMed GONUTS page

[PMID:19625633-4] 4.0 ^4.1 ^4.2 ^4.3 Seo, PJ et al. (2009) The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis. Plant Physiol. 151 275-89 PubMed GONUTS page

[PMID:21398568-5] 5.0 ^5.1 ^5.2 ^5.3 Seo, PJ et al. (2011) The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis. Plant Cell 23 1138-52 PubMed GONUTS page

[PMID:16463103-6] 6.0 ^6.1 ^6.2 Yanhui, C et al. (2006) The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. Plant Mol. Biol. 60 107-24 PubMed GONUTS page

[PMID:11118137-7] 7.0 ^7.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page

[PMID:21873635-8] 8.0 ^8.1 ^8.2 ^8.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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ARATH:MYB96

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