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ARATH:MGN
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Protein mago nashi homolog | |
| External Links | ||
| UniProt | O23676 | |
| EMBL | U89959 CP002684 AY065157 AY114602 AY087464 | |
| PIR | C86153 | |
| RefSeq | NP_171716.1 | |
| UniGene | At.21578 | |
| ProteinModelPortal | O23676 | |
| SMR | O23676 | |
| BioGrid | 22800 | |
| IntAct | O23676 | |
| STRING | 3702.AT1G02140.1-P | |
| PaxDb | O23676 | |
| PRIDE | O23676 | |
| EnsemblPlants | AT1G02140.1 | |
| GeneID | 837560 | |
| KEGG | ath:AT1G02140 | |
| TAIR | AT1G02140 | |
| eggNOG | NOG255527 | |
| HOGENOM | HOG000207428 | |
| InParanoid | O23676 | |
| KO | K12877 | |
| OMA | KEDDTNW | |
| PhylomeDB | O23676 | |
| Reactome | REACT_180054 REACT_187829 REACT_254005 | |
| Proteomes | UP000006548 | |
| Genevestigator | O23676 | |
| GO | GO:0009507 GO:0035145 GO:0016607 GO:0005730 GO:0005654 GO:0009793 GO:0010183 GO:0010628 | |
| Gene3D | 3.30.1560.10 | |
| InterPro | IPR004023 | |
| PANTHER | PTHR12638 | |
| Pfam | PF02792 | |
| SUPFAM | SSF89817 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0035145 |
exon-exon junction complex |
ECO:0000353 |
physical interaction evidence used in manual assertion |
AGI_LocusCode:At1g51510 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016607 |
nuclear speck |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010183 |
pollen tube guidance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009793 |
embryo development ending in seed dormancy |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0035145 |
exon-exon junction complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002736 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002736 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0035145 |
exon-exon junction complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051028 |
mRNA transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016607 |
nuclear speck |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0000932 |
P-body |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Park, NI & Muench, DG (2007) Biochemical and cellular characterization of the plant ortholog of PYM, a protein that interacts with the exon junction complex core proteins Mago and Y14. Planta 225 625-39 PubMed GONUTS page
- ↑ Mufarrege, EF et al. (2011) Functional interconnections of Arabidopsis exon junction complex proteins and genes at multiple steps of gene expression. J. Exp. Bot. 62 5025-36 PubMed GONUTS page
- ↑ Johnson, MA et al. (2004) Arabidopsis hapless mutations define essential gametophytic functions. Genetics 168 971-82 PubMed GONUTS page
- ↑ Pagnussat, GC et al. (2005) Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Development 132 603-14 PubMed GONUTS page
- ↑ Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page
- ↑ 6.0 6.1 Pendle, AF et al. (2005) Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Mol. Biol. Cell 16 260-9 PubMed GONUTS page
- ↑ 7.0 7.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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