ARATH:JMJ14

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	JMJ14 (synonyms: JMJ4, PKDM7B)
Protein Name(s)	Probable lysine-specific demethylase JMJ14 Jumonji domain-containing protein 14 Jumonji domain-containing protein 4 Lysine-specific histone demethylase JMJ14 Protein JUMONJI 14
External Links
UniProt	Q8GUI6
EMBL	AL080253 AL161553 CP002687 CP002687 BT002486 BT010548
PIR	T10582
RefSeq	NP_001031681.1 NP_193773.2
UniGene	At.43482
ProteinModelPortal	Q8GUI6
SMR	Q8GUI6
BioGrid	13079
IntAct	Q8GUI6
PaxDb	Q8GUI6
PRIDE	Q8GUI6
EnsemblPlants	AT4G20400.1
GeneID	827788
KEGG	ath:AT4G20400
TAIR	AT4G20400
eggNOG	NOG327026
HOGENOM	HOG000241335
InParanoid	Q8GUI6
KO	K11446
OMA	GHESERN
PhylomeDB	Q8GUI6
Proteomes	UP000006548
Genevestigator	Q8GUI6
GO	GO:0005654 GO:0051213 GO:0032453 GO:0046872 GO:0003700 GO:0034720 GO:0010216 GO:0009910 GO:0048573 GO:0006355 GO:0006351
InterPro	IPR003889 IPR003888 IPR003347 IPR003349 IPR004198
Pfam	PF05965 PF05964 PF02373 PF02375 PF02928
SMART	SM00542 SM00541 SM00558 SM00545
PROSITE	PS51543 PS51542 PS51184 PS51183

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0048579	negative regulation of long-day photoperiodism, flowering	PMID:20177424^[1]	ECO:0000315			P	Figure 1G and 1H illustrate jmj14-1 and jmj14-2 mutants showing earlier flowering compared to wild-type plants under LD conditions	complete CACAO 8333
	GO:0034720	histone H3-K4 demethylation	PMID:20177424^[1]	ECO:0000314			P	Figure 1C and 1D	complete CACAO 8331
involved_in	GO:0048573	photoperiodism, flowering	PMID:25578968^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:26617990^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:26617990^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:25578968^[2]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0034720	histone H3-K4 demethylation	PMID:25578968^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048579	negative regulation of long-day photoperiodism, flowering	PMID:20177424^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0034720	histone H3-K4 demethylation	PMID:20177424^[1]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048573	photoperiodism, flowering	PMID:20177424^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:25578968^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0042054	histone methyltransferase activity	PMID:29233856^[4]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0034720	histone H3-K4 demethylation	PMID:20202164^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0032453	histone demethylase activity (H3-K4 specific)	PMID:20202164^[5]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0032453	histone demethylase activity (H3-K4 specific)	PMID:20177424^[1]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0010216	maintenance of DNA methylation	PMID:21052090^[6]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009910	negative regulation of flower development	PMID:20202164^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	PMID:11118137^[7]	ECO:0000250	sequence similarity evidence used in manual assertion		F	Seeded From UniProt	Missing: with/from
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:25578968^[2]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
part_of	GO:0035097	histone methyltransferase complex	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:104813 PANTHER:PTN000075014	C	Seeded From UniProt	complete
enables	GO:0034647	histone demethylase activity (H3-trimethyl-K4 specific)	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031759 PANTHER:PTN000075015 PomBase:SPAC1002.05c PomBase:SPBP19A11.06 TAIR:locus:2044697 UniProtKB:P29375 UniProtKB:Q9UGL1 WB:WBGene00004319	F	Seeded From UniProt	complete
enables	GO:0032452	histone demethylase activity	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031759 FB:FBgn0033233 FB:FBgn0053182 MGI:MGI:1922855 MGI:MGI:1924054 MGI:MGI:2442355 MGI:MGI:2446210 MGI:MGI:3606484 PANTHER:PTN000075014 PomBase:SPAC1002.05c PomBase:SPBP19A11.06 SGD:S000000971 SGD:S000002503 SGD:S000003880 TAIR:locus:2044697 TAIR:locus:2128659 TAIR:locus:2196979 UniProtKB:B2RXH2 UniProtKB:C8VTU6 UniProtKB:O75164 UniProtKB:O94953 UniProtKB:P29375 UniProtKB:P41229 UniProtKB:Q10RP4 UniProtKB:Q336N8 UniProtKB:Q53WJ1 UniProtKB:Q5N712 UniProtKB:Q6B0I6 UniProtKB:Q9BY66 UniProtKB:Q9H3R0 UniProtKB:Q9UGL1 WB:WBGene00004319 WB:WBGene00012982	F	Seeded From UniProt	complete
involved_in	GO:0006338	chromatin remodeling	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000075014 PomBase:SPAC1002.05c PomBase:SPAC343.11c PomBase:SPBP19A11.06	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031759 FB:FBgn0033233 FB:FBgn0036004 FB:FBgn0053182 MGI:MGI:104813 MGI:MGI:2136980 MGI:MGI:3606484 MGI:MGI:99781 PANTHER:PTN000075014 PomBase:SPBP19A11.06 RGD:1306378 RGD:1588576 SGD:S000002503 TAIR:locus:2128659 TAIR:locus:2146653 TAIR:locus:504955644 UniProtKB:B2RXH2 UniProtKB:O75164 UniProtKB:O94953 UniProtKB:P29375 UniProtKB:P41229 UniProtKB:Q53WJ1 UniProtKB:Q5N712 UniProtKB:Q92833 UniProtKB:Q9UGL1 WB:WBGene00004319	C	Seeded From UniProt	complete
involved_in	GO:0016571	histone methylation	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0042054	P	Seeded From UniProt	complete
involved_in	GO:0034721	histone H3-K4 demethylation, trimethyl-H3-K4-specific	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0034647	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR003888 InterPro:IPR003889	C	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	PMID:11118137^[7]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006325	chromatin organization	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0156	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
enables	GO:0016491	oxidoreductase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0560	F	Seeded From UniProt	complete
enables	GO:0051213	dioxygenase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0223	F	Seeded From UniProt	complete
involved_in	GO:0055114	oxidation-reduction process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0560	P	Seeded From UniProt	complete
involved_in	GO:0009908	flower development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0287	P	Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0190	C	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 Lu, F et al. (2010) JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis. Cell Res. 20 387-90 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 Ning, YQ et al. (2015) Two novel NAC transcription factors regulate gene expression and flowering time by associating with the histone demethylase JMJ14. Nucleic Acids Res. 43 1469-84 PubMed GONUTS page
↑ ^3.0 ^3.1 Zhang, S et al. () C-terminal domains of a histone demethylase interact with a pair of transcription factors and mediate specific chromatin association. Cell Discov 1 PubMed GONUTS page
↑ Yang, Z et al. (2018) Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases. Plant Cell 30 167-177 PubMed GONUTS page
↑ ^5.0 ^5.1 ^5.2 Yang, W et al. (2010) A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis. Plant J. 62 663-73 PubMed GONUTS page
↑ Deleris, A et al. (2010) Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. EMBO Rep. 11 950-5 PubMed GONUTS page
↑ ^7.0 ^7.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
↑ ^8.0 ^8.1 ^8.2 ^8.3 ^8.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:20177424-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 Lu, F et al. (2010) JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis. Cell Res. 20 387-90 PubMed GONUTS page

[PMID:25578968-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 Ning, YQ et al. (2015) Two novel NAC transcription factors regulate gene expression and flowering time by associating with the histone demethylase JMJ14. Nucleic Acids Res. 43 1469-84 PubMed GONUTS page

[PMID:26617990-3] 3.0 ^3.1 Zhang, S et al. () C-terminal domains of a histone demethylase interact with a pair of transcription factors and mediate specific chromatin association. Cell Discov 1 PubMed GONUTS page

[PMID:29233856-4] Yang, Z et al. (2018) Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases. Plant Cell 30 167-177 PubMed GONUTS page

[PMID:20202164-5] 5.0 ^5.1 ^5.2 Yang, W et al. (2010) A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis. Plant J. 62 663-73 PubMed GONUTS page

[PMID:21052090-6] Deleris, A et al. (2010) Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. EMBO Rep. 11 950-5 PubMed GONUTS page

[PMID:11118137-7] 7.0 ^7.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page

[PMID:21873635-8] 8.0 ^8.1 ^8.2 ^8.3 ^8.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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ARATH:JMJ14

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