ARATH:F4JQG2

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	ATU2AF65A (ECO:0000313 with EMBL:AEE86690.1)
Protein Name(s)	U2 snRNP auxilliary factor, large subunit, splicing factor (ECO:0000313 with EMBL:AEE86690.1)
External Links
UniProt	F4JQG2
EMBL	CP002687
RefSeq	NP_001190937.1
UniGene	At.21204
ProteinModelPortal	F4JQG2
SMR	F4JQG2
STRING	3702.AT4G36690.1
PaxDb	F4JQG2
EnsemblPlants	AT4G36690.4
GeneID	829822
Gramene	AT4G36690.4
Araport	AT4G36690
eggNOG	KOG0120 ENOG410XP92
Proteomes	UP000006548
ExpressionAtlas	F4JQG2
GO	GO:0005634 GO:0000166 GO:0003723 GO:0006397
Gene3D	3.30.70.330
InterPro	IPR012677 IPR000504 IPR006529
Pfam	PF00076
SMART	SM00360
SUPFAM	SSF54928
TIGRFAMs	TIGR01642
PROSITE	PS50102

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0005654	nucleoplasm	PMID:28432478	ECO:0000314			C		Protein called AtU2AF65 in A. thaliana. "As shown in Fig. 2, strong nucleoplasm GFP fluorescence was found except the dark circled area which is presumably nucleolus. We performed FRAP analysis of two areas (nucleoplasm and nucleolus). In the nucleolus area, photobleaching was done to expand the dark circled area. Fluorescence recovered rapidly after photobleaching in both areas, indicating that Arabidopsis U2AF and SF1 proteins are highly mobile nuclear proteins, like the RSZp22 protein."	complete CACAO 12815
	GO:0005730	nucleolus	PMID:28432478	ECO:0000314			C		Protein called AtU2AF65 in A. thaliana. "As shown in Fig. 2, strong nucleoplasm GFP fluorescence was found except the dark circled area which is presumably nucleolus. We performed FRAP analysis of two areas (nucleoplasm and nucleolus). In the nucleolus area, photobleaching was done to expand the dark circled area. Fluorescence recovered rapidly after photobleaching in both areas, indicating that Arabidopsis U2AF and SF1 proteins are highly mobile nuclear proteins, like the RSZp22 protein."	complete CACAO 12816
	GO:0006913	nucleocytoplasmic transport	PMID:28432478	ECO:0000314			P		Protein called AtU2AF65 in A. thaliana. "As shown in Fig. 5, the GFP fluorescence of all these proteins in nuclei was strongly reduced during the course of cytoplasmic photobleaching. … These results demonstrate that AtU2AF35, AtU2AF65, and AtSF1 are nucleocytoplasmic shuttling proteins"	complete CACAO 12832
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000504 InterPro:IPR035979	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006529	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006529	C		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006529	P		Seeded From UniProt	complete
involved_in	GO:0008380	RNA splicing	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0508	P		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0507	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0539	C		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000040	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000414619	F		Seeded From UniProt	complete
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References

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