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ARATH:DRM2
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | DRM2 | |
| Protein Name(s) | DNA (cytosine-5)-methyltransferase DRM2
Protein DOMAINS REARRANGED METHYLASE 2 | |
| External Links | ||
| UniProt | Q9M548 | |
| EMBL | AF240695 AL163792 AL163792 CP002688 AK176138 AK220953 AK229197 | |
| PIR | T48635 T48636 | |
| RefSeq | NP_196966.2 | |
| UniGene | At.5084 | |
| ProteinModelPortal | Q9M548 | |
| SMR | Q9M548 | |
| BioGrid | 16592 | |
| DIP | DIP-59279N | |
| IntAct | Q9M548 | |
| STRING | 3702.AT5G14620.1-P | |
| REBASE | 4601 | |
| PaxDb | Q9M548 | |
| PRIDE | Q9M548 | |
| EnsemblPlants | AT5G14620.1 | |
| GeneID | 831315 | |
| KEGG | ath:AT5G14620 | |
| TAIR | AT5G14620 | |
| eggNOG | NOG70699 | |
| HOGENOM | HOG000030355 | |
| InParanoid | Q9M548 | |
| OMA | HSSLFYH | |
| PhylomeDB | Q9M548 | |
| BioCyc | ARA:AT5G14620-MONOMER | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9M548 | |
| GO | GO:0005654 GO:0005634 GO:0003886 GO:0003677 GO:0050832 GO:0006306 GO:0016458 GO:0051567 | |
| Gene3D | 3.40.50.150 | |
| InterPro | IPR029063 IPR030380 IPR009060 IPR015940 | |
| SMART | SM00165 | |
| SUPFAM | SSF46934 SSF53335 | |
| PROSITE | PS51680 PS50030 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009008 |
DNA-methyltransferase activity |
ECO:0000315 |
F |
Figure 2 |
complete | |||||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009008 |
DNA-methyltransferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016458 |
gene silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051567 |
histone H3-K9 methylation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT1G69770 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050832 |
defense response to fungus |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT5G15380 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
Missing: with/from | |||
|
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Naumann, U et al. (2011) Genetic evidence that DNA methyltransferase DRM2 has a direct catalytic role in RNA-directed DNA methylation in Arabidopsis thaliana. Genetics 187 977-9 PubMed GONUTS page
- ↑ Gao, Z et al. (2010) An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature 465 106-9 PubMed GONUTS page
- ↑ Cao, X & Jacobsen, SE (2002) Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr. Biol. 12 1138-44 PubMed GONUTS page
- ↑ Johnson, LM et al. (2007) The SRA methyl-cytosine-binding domain links DNA and histone methylation. Curr. Biol. 17 379-84 PubMed GONUTS page
- ↑ López, A et al. (2011) The RNA silencing enzyme RNA polymerase v is required for plant immunity. PLoS Genet. 7 e1002434 PubMed GONUTS page
- ↑ Li, CF et al. (2006) An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana. Cell 126 93-106 PubMed GONUTS page
- ↑ Cao, X & Jacobsen, SE (2002) Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc. Natl. Acad. Sci. U.S.A. 99 Suppl 4 16491-8 PubMed GONUTS page
- ↑ Cao, X et al. (2000) Conserved plant genes with similarity to mammalian de novo DNA methyltransferases. Proc. Natl. Acad. Sci. U.S.A. 97 4979-84 PubMed GONUTS page
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