GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ARATH:DRE1A
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | DREB1A (synonyms: CBF3, CRAP2, ERF072) | |
| Protein Name(s) | Dehydration-responsive element-binding protein 1A
Protein DREB1A C-repeat/dehydration-responsive element-binding factor 3 C-repeat-binding factor 3 CRT/DRE-binding factor 3 Cold resistance-related AP2 transcription factor | |
| External Links | ||
| UniProt | Q9M0L0 | |
| EMBL | AB007787 AB013815 AF074602 AF076155 AF062924 AY667247 AY691904 DQ372533 DQ415923 AL022197 AL161563 CP002687 BT024594 | |
| PIR | D85294 JE0297 T05799 T51830 | |
| RefSeq | NP_567720.1 | |
| UniGene | At.231 | |
| ProteinModelPortal | Q9M0L0 | |
| SMR | Q9M0L0 | |
| BioGrid | 13939 | |
| PRIDE | Q9M0L0 | |
| EnsemblPlants | AT4G25480.1 | |
| GeneID | 828652 | |
| KEGG | ath:AT4G25480 | |
| GeneFarm | 3593 | |
| TAIR | AT4G25480 | |
| eggNOG | NOG303203 | |
| InParanoid | Q9M0L0 | |
| KO | K09286 | |
| OMA | MNIFETY | |
| PhylomeDB | Q9M0L0 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9M0L0 | |
| Genevestigator | Q9M0L0 | |
| GO | GO:0005634 GO:0003677 GO:0003700 GO:0009631 GO:0009409 GO:0009414 GO:0006351 | |
| Gene3D | 3.30.730.10 | |
| InterPro | IPR001471 IPR016177 | |
| Pfam | PF00847 | |
| PRINTS | PR00367 | |
| SMART | SM00380 | |
| SUPFAM | SSF54171 | |
| PROSITE | PS51032 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0009631 |
cold acclimation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009414 |
response to water deprivation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009414 |
response to water deprivation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Novillo, F et al. (2007) Arabidopsis CBF1 and CBF3 have a different function than CBF2 in cold acclimation and define different gene classes in the CBF regulon. Proc. Natl. Acad. Sci. U.S.A. 104 21002-7 PubMed GONUTS page
- ↑ Sakuma, Y et al. (2006) Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression. Plant Cell 18 1292-309 PubMed GONUTS page
- ↑ 3.0 3.1 Seki, M et al. (2001) Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray. Plant Cell 13 61-72 PubMed GONUTS page
- ↑ Kasuga, M et al. (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat. Biotechnol. 17 287-91 PubMed GONUTS page
- ↑ Seki, M et al. (2002) Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. Plant J. 31 279-92 PubMed GONUTS page
- ↑ Vergnolle, C et al. (2005) The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. Plant Physiol. 139 1217-33 PubMed GONUTS page
- ↑ Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
