GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

AGRT5:A9CJ53

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Agrobacterium tumefaciens (strain C58 / ATCC 33970). (176299)
Gene Name(s) cisY (ECO:0000313 with EMBL:AAK87184.1)
Protein Name(s) Citrate synthase (ECO:0000256 with PIRNR:PIRNR001369, ECO:0000256 with RuleBase:RU003370)
External Links
UniProt A9CJ53
EMBL AE007869
PIR AH2747
G97528
RefSeq NP_354399.1
ProteinModelPortal A9CJ53
SMR A9CJ53
STRING 176299.Atu1392
EnsemblBacteria AAK87184
GeneID 1133430
KEGG atu:Atu1392
PATRIC 20812561
eggNOG COG0372
HOGENOM HOG000021224
KO K01647
OMA NKEDGVR
OrthoDB EOG6P8TP4
BioCyc AGRO:ATU1392-MONOMER
Proteomes UP000000813
GO GO:0005737
GO:0004108
GO:0044262
GO:0006099
Gene3D 1.10.230.10
1.10.580.10
InterPro IPR016142
IPR016143
IPR002020
IPR016141
IPR019810
IPR024176
IPR010953
PANTHER PTHR11739
Pfam PF00285
PIRSF PIRSF001369
PRINTS PR00143
SUPFAM SSF48256
TIGRFAMs TIGR01798
PROSITE PS00480

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0003878

ATP citrate synthase activity

PMID:15995199[1]

ECO:0000269

F

Figure 4 shows shows that the mutant 1392 grew on both plates containing arabinose and kanamycin growth media.Growth in the absence of arabinose indicates that the cell has a functional citrate synthase activity

complete

enables

GO:0004108

citrate (Si)-synthase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010953

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010953

C

Seeded From UniProt

complete

involved_in

GO:0006099

tricarboxylic acid cycle

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR019810

P

Seeded From UniProt

complete

enables

GO:0046912

transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002020
InterPro:IPR019810
InterPro:IPR036969

F

Seeded From UniProt

complete

involved_in

GO:0006099

tricarboxylic acid cycle

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0816

P

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

involved_in

GO:0006099

tricarboxylic acid cycle

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00223

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Suksomtip, M et al. (2005) Citrate synthase mutants of Agrobacterium are attenuated in virulence and display reduced vir gene induction. J. Bacteriol. 187 4844-52 PubMed GONUTS page