GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

AGRT5:A9CIC0

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Agrobacterium tumefaciens (strain C58 / ATCC 33970). (176299)
Gene Name(s) sco1 (ECO:0000313 with EMBL:AAK87823.1)
Protein Name(s) Membrane protein (ECO:0000313 with EMBL:AAK87823.1)
External Links
UniProt A9CIC0
EMBL AE007869
PIR AB2831
F97608
RefSeq NP_355038.1
ProteinModelPortal A9CIC0
STRING 176299.Atu2073
EnsemblBacteria AAK87823
GeneID 1134111
KEGG atu:Atu2073
PATRIC 20813931
eggNOG COG1999
HOGENOM HOG000258139
KO K07152
OMA PERDNPA
OrthoDB EOG6S26DB
BioCyc AGRO:ATU2073-MONOMER
Proteomes UP000000813
Gene3D 3.40.30.10
InterPro IPR003782
IPR012336
PANTHER PTHR12151
Pfam PF02630
SUPFAM SSF52833
PROSITE PS51352

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0006461

protein complex assembly

PMID:19220469[1]

ECO:0000315

P

Figure 2 supports the function of the Sco1 gene by showing that it is essential for Cytochrome c oxidase activity.

complete

GO:0006878

cellular copper ion homeostasis

PMID:19220469[1]

ECO:0000315

P

Figure 2 supports the function of the Sco1 gene by showing that it is essential for Cytochrome c oxidase activity.

complete

GO:0004129

cytochrome-c oxidase activity

PMID:19220469[1]

ECO:0000315

F

Figure 2 supports the function of the Sco1 gene by showing that it is essential for Cytochrome c oxidase activity.

complete

part_of

GO:0005623

cell

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0045454

C

Seeded From UniProt

complete

involved_in

GO:0045454

cell redox homeostasis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013766

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Saenkham, P et al. (2009) Mutation in sco affects cytochrome c assembly and alters oxidative stress resistance in Agrobacterium tumefaciens. FEMS Microbiol. Lett. 293 122-9 PubMed GONUTS page