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YERPE:A0A384L3J4
Contents
Species (Taxon ID) | Yersinia pestis. (632) | |
Gene Name(s) | cap (ECO:0000313 with EMBL:CAL18860.1) | |
Protein Name(s) | cAMP-activated global transcriptional regulator CRP (ECO:0000313 with EMBL:PWF35750.1)
cAMP-regulatory protein (ECO:0000313 with EMBL:CAL18860.1) | |
External Links | ||
UniProt | A0A384L3J4 | |
EMBL | AL590842 QANK01000056 | |
PIR | AC0022 | |
RefSeq | WP_002212297.1 YP_002345259.1 | |
PDB | 6DT4 | |
PDBsum | 6DT4 | |
DNASU | 1148903 | |
GeneID | 1173020 31911418 | |
KEGG | ype:YPO0175 ypj:CH55_2915 ypl:CH46_741 ypv:BZ15_3396 ypw:CH59_2267 | |
PATRIC | fig|1028802.3.peg.174 | |
eggNOG | ENOG4107RYR COG0664 | |
HOGENOM | HOG000250565 | |
KO | K10914 | |
Proteomes | UP000000815 | |
CollecTF | EXPREG_00000ff0 | |
GO | GO:0003677 GO:0003700 | |
CDD | cd00038 | |
Gene3D | 1.10.10.10 2.60.120.10 | |
InterPro | IPR018490 IPR018488 IPR000595 IPR012318 IPR014710 IPR018335 IPR036388 IPR036390 | |
Pfam | PF00027 PF13545 | |
PRINTS | PR00034 | |
SMART | SM00100 SM00419 | |
SUPFAM | SSF46785 SSF51206 | |
PROSITE | PS00888 PS00889 PS50042 PS00042 PS51063 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0005657 |
primer extension assay evidence used in manual assertion |
P |
Figure 5 shows the primer extension analysis of the sycO-ypkA-yopJ operon with and without CRP. A wild type with CRP and a strain without CRP were used. The WT shows no primer extension product while the strain without CRP shows product. The presence of the primer extension product in deleted CRP indicates mRNA presence. The lack of primer extension product in the WT indicates no mRNA presence. Because mRNA presence is high only in the deleted CRP strain, CRP is repressing transcription of the sycO-ypkA-yopJ operon. |
complete | ||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zhan, L et al. (2009) Direct and negative regulation of the sycO-ypkA-ypoJ operon by cyclic AMP receptor protein (CRP) in Yersinia pestis. BMC Microbiol. 9 178 PubMed GONUTS page
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