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YEAST:SNF1
Contents
Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
Gene Name(s) | SNF1 (synonyms: CAT1, CCR1, GLC2, PAS14) | |
Protein Name(s) | Carbon catabolite-derepressing protein kinase | |
External Links | ||
UniProt | P06782 | |
EMBL | M13971 U33050 BK006938 | |
PIR | A26030 | |
RefSeq | NP_010765.3 | |
PDB | 2FH9 2QLV 3DAE 3HYH 3MN3 3T4N 3TDH 3TE5 | |
PDBsum | 2FH9 2QLV 3DAE 3HYH 3MN3 3T4N 3TDH 3TE5 | |
ProteinModelPortal | P06782 | |
SMR | P06782 | |
BioGrid | 32529 | |
DIP | DIP-18N | |
IntAct | P06782 | |
MINT | MINT-364314 | |
STRING | 4932.YDR477W | |
MaxQB | P06782 | |
PaxDb | P06782 | |
PeptideAtlas | P06782 | |
EnsemblFungi | [example_ID YDR477W] | |
GeneID | 852088 | |
KEGG | sce:YDR477W | |
CYGD | YDR477w | |
SGD | S000002885 | |
eggNOG | COG0515 | |
GeneTree | ENSGT00760000118892 | |
HOGENOM | HOG000233016 | |
InParanoid | P06782 | |
KO | K12761 | |
OMA | MSSFSAY | |
OrthoDB | EOG793BK1 | |
BioCyc | YEAST:G3O-30003-MONOMER | |
BRENDA | 2.7.11.1 | |
Reactome | REACT_209479 REACT_212098 REACT_254023 REACT_260529 | |
EvolutionaryTrace | P06782 | |
NextBio | 970409 | |
Proteomes | UP000002311 | |
Genevestigator | P06782 | |
GO | GO:0031588 GO:0005737 GO:0000324 GO:0005641 GO:0031965 GO:0005634 GO:0004679 GO:0005524 GO:0004674 GO:0005975 GO:0007155 GO:0006995 GO:0071940 GO:0001403 GO:0017148 GO:1900436 GO:0045722 GO:0006468 GO:0007124 GO:0006109 GO:0001302 GO:0090606 | |
InterPro | IPR028375 IPR011009 IPR000719 IPR017441 IPR002290 IPR008271 IPR013896 | |
Pfam | PF00069 PF08587 | |
SMART | SM00220 | |
SUPFAM | SSF103243 SSF56112 | |
PROSITE | PS00107 PS50011 PS00108 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009758 |
carbohydrate utilization |
ECO:0000315 |
P |
Table 4 |
complete | |||||
involved_in |
GO:0000132 |
establishment of mitotic spindle orientation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
SGD:S000001762 |
P |
happens_during:(GO:0000089) |
Seeded From UniProt |
complete | |
involved_in |
GO:0000132 |
establishment of mitotic spindle orientation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
happens_during:(GO:0000089) |
Seeded From UniProt |
complete | ||
part_of |
GO:0000144 |
cellular bud neck septin ring |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004672 |
protein kinase activity |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000222 |
positive regulation of pseudohyphal growth |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
SGD:S000000270,SGD:S000002450 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000222 |
positive regulation of pseudohyphal growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_direct_input:(UniProtKB:P27705) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_direct_input:(UniProtKB:P27705) |
Seeded From UniProt |
complete | ||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P27705) |
Seeded From UniProt |
complete | ||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P27705) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016239 |
positive regulation of macroautophagy |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006986 |
response to unfolded protein |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005086 |
ARF guanyl-nucleotide exchange factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:1900436 |
positive regulation of filamentous growth of a population of unicellular organisms in response to starvation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071940 |
fungal-type cell wall assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
happens_during:(GO:0033554) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045722 |
positive regulation of gluconeogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045722 |
positive regulation of gluconeogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045722 |
positive regulation of gluconeogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090606 |
single-species surface biofilm formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031588 |
nucleotide-activated protein kinase complex |
ECO:0000353 |
physical interaction evidence used in manual assertion |
SGD:S000000829 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0031588 |
nucleotide-activated protein kinase complex |
ECO:0000353 |
physical interaction evidence used in manual assertion |
SGD:S000003083 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0031588 |
nucleotide-activated protein kinase complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031588 |
nucleotide-activated protein kinase complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017148 |
negative regulation of translation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
SGD:S000000735 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0017148 |
negative regulation of translation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000222 |
positive regulation of pseudohyphal growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006995 |
cellular response to nitrogen starvation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005641 |
nuclear envelope lumen |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004679 |
AMP-activated protein kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004679 |
AMP-activated protein kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004679 |
AMP-activated protein kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
happens_during:(GO:0042149) |
Seeded From UniProt |
complete | ||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P06782) |
Seeded From UniProt |
complete | ||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0001403 |
invasive growth in response to glucose limitation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001403 |
invasive growth in response to glucose limitation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001302 |
replicative cell aging |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
SGD:S000002830 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001302 |
replicative cell aging |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000324 |
fungal-type vacuole |
ECO:0000353 |
physical interaction evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035556 |
intracellular signal transduction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0023169 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104754 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0023169 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0025625 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004672 |
protein kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031965 |
nuclear membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Carlson, M et al. (1981) Mutants of yeast defective in sucrose utilization. Genetics 98 25-40 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Tripodi, F et al. (2018) Snf1/AMPK is involved in the mitotic spindle alignment in Saccharomyces cerevisiae. Sci Rep 8 5853 PubMed GONUTS page
- ↑ Reinders, J et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J. Proteome Res. 5 1543-54 PubMed GONUTS page
- ↑ 4.0 4.1 Ptacek, J et al. (2005) Global analysis of protein phosphorylation in yeast. Nature 438 679-84 PubMed GONUTS page
- ↑ Sickmann, A et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc. Natl. Acad. Sci. U.S.A. 100 13207-12 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Kuchin, S et al. (2002) Snf1 protein kinase and the repressors Nrg1 and Nrg2 regulate FLO11, haploid invasive growth, and diploid pseudohyphal differentiation. Mol. Cell. Biol. 22 3994-4000 PubMed GONUTS page
- ↑ Orlova, M et al. (2006) Nitrogen availability and TOR regulate the Snf1 protein kinase in Saccharomyces cerevisiae. Eukaryotic Cell 5 1831-7 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 McCartney, RR et al. (2016) Activation and inhibition of Snf1 kinase activity by phosphorylation within the activation loop. Biochim. Biophys. Acta 1864 1518-28 PubMed GONUTS page
- ↑ Wang, Z et al. (2001) Antagonistic controls of autophagy and glycogen accumulation by Snf1p, the yeast homolog of AMP-activated protein kinase, and the cyclin-dependent kinase Pho85p. Mol. Cell. Biol. 21 5742-52 PubMed GONUTS page
- ↑ Ferrer-Dalmau, J et al. (2015) Protein kinase Snf1 is involved in the proper regulation of the unfolded protein response in Saccharomyces cerevisiae. Biochem. J. 468 33-47 PubMed GONUTS page
- ↑ Hsu, JW et al. (2015) Snf1/AMP-activated protein kinase activates Arf3p to promote invasive yeast growth via a non-canonical GEF domain. Nat Commun 6 7840 PubMed GONUTS page
- ↑ Karunanithi, S & Cullen, PJ (2012) The filamentous growth MAPK Pathway Responds to Glucose Starvation Through the Mig1/2 transcriptional repressors in Saccharomyces cerevisiae. Genetics 192 869-87 PubMed GONUTS page
- ↑ Backhaus, K et al. (2013) Mutations in SNF1 complex genes affect yeast cell wall strength. Eur. J. Cell Biol. 92 383-95 PubMed GONUTS page
- ↑ Lesage, P et al. (1996) Yeast SNF1 protein kinase interacts with SIP4, a C6 zinc cluster transcriptional activator: a new role for SNF1 in the glucose response. Mol. Cell. Biol. 16 1921-8 PubMed GONUTS page
- ↑ Randez-Gil, F et al. (1997) Glucose derepression of gluconeogenic enzymes in Saccharomyces cerevisiae correlates with phosphorylation of the gene activator Cat8p. Mol. Cell. Biol. 17 2502-10 PubMed GONUTS page
- ↑ Rahner, A et al. (1996) Dual influence of the yeast Cat1p (Snf1p) protein kinase on carbon source-dependent transcriptional activation of gluconeogenic genes by the regulatory gene CAT8. Nucleic Acids Res. 24 2331-7 PubMed GONUTS page
- ↑ Jiang, R & Carlson, M (1997) The Snf1 protein kinase and its activating subunit, Snf4, interact with distinct domains of the Sip1/Sip2/Gal83 component in the kinase complex. Mol. Cell. Biol. 17 2099-106 PubMed GONUTS page
- ↑ 18.0 18.1 Celenza, JL et al. (1989) Molecular analysis of the SNF4 gene of Saccharomyces cerevisiae: evidence for physical association of the SNF4 protein with the SNF1 protein kinase. Mol. Cell. Biol. 9 5045-54 PubMed GONUTS page
- ↑ Nath, N et al. (2002) Purification and characterization of Snf1 kinase complexes containing a defined Beta subunit composition. J. Biol. Chem. 277 50403-8 PubMed GONUTS page
- ↑ 20.0 20.1 Shirra, MK et al. (2008) A chemical genomics study identifies Snf1 as a repressor of GCN4 translation. J. Biol. Chem. 283 35889-98 PubMed GONUTS page
- ↑ 21.0 21.1 Vyas, VK et al. (2003) Snf1 kinases with different beta-subunit isoforms play distinct roles in regulating haploid invasive growth. Mol. Cell. Biol. 23 1341-8 PubMed GONUTS page
- ↑ 22.0 22.1 22.2 McCartney, RR & Schmidt, MC (2001) Regulation of Snf1 kinase. Activation requires phosphorylation of threonine 210 by an upstream kinase as well as a distinct step mediated by the Snf4 subunit. J. Biol. Chem. 276 36460-6 PubMed GONUTS page
- ↑ 23.0 23.1 23.2 Sarma, NJ et al. (2007) Glucose-responsive regulators of gene expression in Saccharomyces cerevisiae function at the nuclear periphery via a reverse recruitment mechanism. Genetics 175 1127-35 PubMed GONUTS page
- ↑ 24.0 24.1 Woods, A et al. (1994) Yeast SNF1 is functionally related to mammalian AMP-activated protein kinase and regulates acetyl-CoA carboxylase in vivo. J. Biol. Chem. 269 19509-15 PubMed GONUTS page
- ↑ 25.0 25.1 Celenza, JL & Carlson, M (1989) Mutational analysis of the Saccharomyces cerevisiae SNF1 protein kinase and evidence for functional interaction with the SNF4 protein. Mol. Cell. Biol. 9 5034-44 PubMed GONUTS page
- ↑ Cullen, PJ & Sprague, GF Jr (2000) Glucose depletion causes haploid invasive growth in yeast. Proc. Natl. Acad. Sci. U.S.A. 97 13619-24 PubMed GONUTS page
- ↑ 27.0 27.1 Ashrafi, K et al. (2000) Sip2p and its partner snf1p kinase affect aging in S. cerevisiae. Genes Dev. 14 1872-85 PubMed GONUTS page
- ↑ Vincent, O et al. (2001) Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism. Genes Dev. 15 1104-14 PubMed GONUTS page
- ↑ 29.0 29.1 29.2 29.3 29.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Chen, L et al. (2009) Structural insight into the autoinhibition mechanism of AMP-activated protein kinase. Nature 459 1146-9 PubMed GONUTS page
- ↑ Nayak, V et al. (2006) Structure and dimerization of the kinase domain from yeast Snf1, a member of the Snf1/AMPK protein family. Structure 14 477-85 PubMed GONUTS page
a
c
- GO:0009758 ! carbohydrate utilization
- GO:0005975 ! carbohydrate metabolic process
- GO:0000144 ! cellular bud neck septin ring
- GO:0006995 ! cellular response to nitrogen starvation
- GO:0042149 ! cellular response to glucose starvation
- GO:0033554 ! cellular response to stress
- GO:0007155 ! cell adhesion
- GO:0005737 ! cytoplasm
d
i
n
p
- GO:0016310 ! phosphorylation
- GO:0016239 ! positive regulation of macroautophagy
- GO:1900436 ! positive regulation of filamentous growth of a population of unicellular organisms in response to starvation
- GO:2000222 ! positive regulation of pseudohyphal growth
- GO:0045722 ! positive regulation of gluconeogenesis
- GO:0004672 ! protein kinase activity
- GO:0006468 ! protein phosphorylation
- GO:0004674 ! protein serine/threonine kinase activity
s