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YEAST:RNP1
Contents
| Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
| Gene Name(s) | RNP1 | |
| Protein Name(s) | Ribonucleoprotein 1 | |
| External Links | ||
| UniProt | P32385 | |
| EMBL | M88608 Z73152 BK006945 | |
| PIR | S64798 | |
| RefSeq | NP_013054.1 | |
| ProteinModelPortal | P32385 | |
| SMR | P32385 | |
| BioGrid | 31268 | |
| DIP | DIP-1568N | |
| IntAct | P32385 | |
| MINT | MINT-394172 | |
| STRING | 4932.YLL046C | |
| PaxDb | P32385 | |
| EnsemblFungi | [example_ID YLL046C] | |
| GeneID | 850680 | |
| KEGG | sce:YLL046C | |
| CYGD | YLL046c | |
| SGD | S000003969 | |
| eggNOG | NOG292466 | |
| GeneTree | ENSGT00530000067047 | |
| InParanoid | P32385 | |
| OrthoDB | EOG72NS1S | |
| BioCyc | YEAST:G3O-32146-MONOMER | |
| NextBio | 966680 | |
| Proteomes | UP000002311 | |
| Genevestigator | P32385 | |
| GO | GO:0005737 GO:0000166 GO:0003723 GO:0042254 | |
| Gene3D | 3.30.70.330 | |
| InterPro | IPR012677 IPR000504 | |
| Pfam | PF00076 | |
| SMART | SM00360 | |
| PROSITE | PS50102 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0042254 |
ribosome biogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0265297 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0010494 |
cytoplasmic stress granule |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000610046 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008266 |
poly(U) RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0264270 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008143 |
poly(A) binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000610044 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000610044 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0264270 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000610044 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0264270 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000114 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Ripmaster, TL & Woolford, JL Jr (1993) A protein containing conserved RNA-recognition motifs is associated with ribosomal subunits in Saccharomyces cerevisiae. Nucleic Acids Res. 21 3211-6 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
