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YEAST:HMI1

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Species (Taxon ID) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s) HMI1
Protein Name(s) ATP-dependent DNA helicase HMI1, mitochondrial
External Links
UniProt Q12039
EMBL U26030
Z48149
X83121
Z74837
BK006948
PIR S57374
RefSeq NP_014546.1
ProteinModelPortal Q12039
SMR Q12039
BioGrid 34307
DIP DIP-4225N
MINT MINT-509468
MaxQB Q12039
PaxDb Q12039
EnsemblFungi [example_ID YOL095C]
GeneID 854058
KEGG sce:YOL095C
CYGD YOL095c
SGD S000005455
eggNOG COG0210
GeneTree ENSGT00530000066700
HOGENOM HOG000112919
InParanoid Q12039
OMA QCIYEFL
OrthoDB EOG77DJGZ
BioCyc YEAST:G3O-33495-MONOMER
NextBio 975653
Proteomes UP000002311
Genevestigator Q12039
GO GO:0005743
GO:0005759
GO:0005524
GO:0043140
GO:0003677
GO:0032508
GO:0006281
GO:0032042
GO:0000002
Gene3D 3.40.50.300
InterPro IPR014017
IPR000212
IPR027417
IPR014016
PANTHER PTHR11070
Pfam PF00580
PF13361
SUPFAM SSF52540
PROSITE PS51198
PS51217

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005739

mitochondrion

PMID:16823961[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0043140

ATP-dependent 3'-5' DNA helicase activity

PMID:16358299[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0032042

mitochondrial DNA metabolic process

PMID:16358299[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005759

mitochondrial matrix

PMID:10409639[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0000002

mitochondrial genome maintenance

PMID:10669756[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0043140

ATP-dependent 3'-5' DNA helicase activity

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10426
PANTHER:PTN000116141
SGD:S000005455
UniProtKB:A0A1D8PUB1
UniProtKB:P9WMQ1
UniProtKB:Q8I3W6

F

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11064
PANTHER:PTN000116141
PomBase:SPAC4H3.05
PomBase:SPBC336.01
SGD:S000003628
UniProtKB:F1ND48
UniProtKB:G3XD04
UniProtKB:P9WMQ1

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000116143
PomBase:SPBC336.01
SGD:S000003628
UniProtKB:Q8I3W6
UniProtKB:Q8NFZ0

C

Seeded From UniProt

complete

involved_in

GO:0000725

recombinational repair

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000116141
PomBase:SPAC4H3.05
PomBase:SPBC336.01
UniProtKB:F1ND48

P

Seeded From UniProt

complete

involved_in

GO:0032508

DNA duplex unwinding

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004003

P

Seeded From UniProt

complete

involved_in

GO:0032508

DNA duplex unwinding

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0043140

P

Seeded From UniProt

complete

involved_in

GO:0032508

DNA duplex unwinding

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0043140

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000212

F

Seeded From UniProt

complete

enables

GO:0004003

ATP-dependent DNA helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000212

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000212
InterPro:IPR014016
InterPro:IPR014017

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014017

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005743

mitochondrial inner membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0999
UniProtKB-SubCell:SL-0168

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

enables

GO:0004386

helicase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0347

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0496

C

Seeded From UniProt

complete

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Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Reinders, J et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J. Proteome Res. 5 1543-54 PubMed GONUTS page
  2. ↑ 2.0 2.1 Monroe, DS Jr et al. (2005) Biochemical and genetic characterization of Hmi1p, a yeast DNA helicase involved in the maintenance of mitochondrial DNA. Yeast 22 1269-86 PubMed GONUTS page
  3. ↑ Lee, CM et al. (1999) The DNA helicase, Hmi1p, is transported into mitochondria by a C-terminal cleavable targeting signal. J. Biol. Chem. 274 20937-42 PubMed GONUTS page
  4. ↑ Sedman, T et al. (2000) A DNA helicase required for maintenance of the functional mitochondrial genome in Saccharomyces cerevisiae. Mol. Cell. Biol. 20 1816-24 PubMed GONUTS page
  5. ↑ 5.0 5.1 5.2 5.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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