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YEAST:FLO5
Contents
| Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
| Gene Name(s) | FLO5 | |
| Protein Name(s) | Flocculation protein FLO5
Flocculin-5 | |
| External Links | ||
| UniProt | P38894 | |
| EMBL | U00029 BK006934 | |
| PIR | S48992 | |
| RefSeq | NP_012081.1 | |
| PDB | 2XJP 2XJQ 2XJR 2XJS 2XJT 2XJU 2XJV 4AHW 4AHX 4AHY 4AHZ 4AI0 4AI1 4AI2 4AI3 | |
| PDBsum | 2XJP 2XJQ 2XJR 2XJS 2XJT 2XJU 2XJV 4AHW 4AHX 4AHY 4AHZ 4AI0 4AI1 4AI2 4AI3 | |
| ProteinModelPortal | P38894 | |
| SMR | P38894 | |
| BioGrid | 36645 | |
| DIP | DIP-4056N | |
| IntAct | P38894 | |
| MINT | MINT-498170 | |
| STRING | 4932.YHR211W | |
| EnsemblFungi | [example_ID YHR211W] | |
| GeneID | 856618 | |
| KEGG | sce:YHR211W | |
| CYGD | YHR211w | |
| SGD | S000001254 | |
| eggNOG | NOG12793 | |
| GeneTree | ENSGT00660000095872 | |
| HOGENOM | HOG000112611 | |
| InParanoid | P38894 | |
| OMA | DISTTTH | |
| OrthoDB | EOG7H4F6F | |
| BioCyc | YEAST:G3O-31236-MONOMER | |
| EvolutionaryTrace | P38894 | |
| NextBio | 982550 | |
| Proteomes | UP000002311 | |
| Genevestigator | P38894 | |
| GO | GO:0031225 GO:0005576 GO:0009277 GO:0005537 GO:0031589 GO:0000128 GO:0000501 | |
| Gene3D | 3.90.182.10 | |
| InterPro | IPR001389 IPR025928 IPR011658 | |
| Pfam | PF00624 PF13928 PF07691 | |
| SMART | SM00758 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0071944 |
cell periphery |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0036281 |
coflocculation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031589 |
cell-substrate adhesion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009277 |
fungal-type cell wall |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005537 |
mannose binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005537 |
mannose binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000501 |
flocculation via cell wall protein-carbohydrate interaction |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
Missing: with/from | |||
|
involved_in |
GO:0000501 |
flocculation via cell wall protein-carbohydrate interaction |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000128 |
flocculation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000128 |
flocculation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031225 |
anchored component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005618 |
cell wall |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Yofe, I et al. (2016) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nat. Methods 13 371-378 PubMed GONUTS page
- ↑ Rossouw, D et al. (2015) Co-Flocculation of Yeast Species, a New Mechanism to Govern Population Dynamics in Microbial Ecosystems. PLoS ONE 10 e0136249 PubMed GONUTS page
- ↑ 3.0 3.1 Van Mulders, SE et al. (2009) Phenotypic diversity of Flo protein family-mediated adhesion in Saccharomyces cerevisiae. FEMS Yeast Res. 9 178-90 PubMed GONUTS page
- ↑ Bony, M et al. (1998) Distribution of the flocculation protein, flop, at the cell surface during yeast growth: the availability of flop determines the flocculation level. Yeast 14 25-35 PubMed GONUTS page
- ↑ Stratford, M (1989) Evidence for two mechanisms of flocculation in Saccharomyces cerevisiae. Yeast 5 Spec No S441-5 PubMed GONUTS page
- ↑ Teunissen, AW et al. (1995) Localization of the dominant flocculation genes FLO5 and FLO8 of Saccharomyces cerevisiae. Yeast 11 735-45 PubMed GONUTS page
- ↑ Bidard, F et al. (1994) Cloning and analysis of a FLO5 flocculation gene from S. cerevisiae. Curr. Genet. 25 196-201 PubMed GONUTS page
- ↑ Nonklang, S et al. (2009) Construction of flocculent Kluyveromyces marxianus strains suitable for high-temperature ethanol fermentation. Biosci. Biotechnol. Biochem. 73 1090-5 PubMed GONUTS page
