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YEAST:ELP3
Contents
| Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
| Gene Name(s) | ELP3 (synonyms: HPA1, TOT3) | |
| Protein Name(s) | Elongator complex protein 3
Gamma-toxin target 3 | |
| External Links | ||
| UniProt | Q02908 | |
| EMBL | U43281 BK006949 | |
| PIR | S61980 | |
| RefSeq | NP_015239.1 | |
| ProteinModelPortal | Q02908 | |
| SMR | Q02908 | |
| BioGrid | 36095 | |
| DIP | DIP-2385N | |
| IntAct | Q02908 | |
| MINT | Q02908 | |
| STRING | 4932.YPL086C | |
| iPTMnet | Q02908 | |
| MaxQB | Q02908 | |
| PaxDb | Q02908 | |
| PRIDE | Q02908 | |
| EnsemblFungi | YPL086C | |
| GeneID | 856019 | |
| KEGG | sce:YPL086C | |
| EuPathDB | FungiDB:YPL086C | |
| SGD | S000006007 | |
| GeneTree | ENSGT00390000013141 | |
| HOGENOM | HOG000227514 | |
| InParanoid | Q02908 | |
| KO | K07739 | |
| OMA | SYTGKEP | |
| OrthoDB | EOG092C1F4W | |
| BioCyc | YEAST:G3O-33992-MONOMER | |
| PRO | PR:Q02908 | |
| Proteomes | UP000002311 | |
| GO | GO:0005737 GO:0005829 GO:0033588 GO:0005719 GO:0005654 GO:0005634 GO:0004402 GO:0051536 GO:0046872 GO:0009294 GO:0015031 GO:0010928 GO:2000025 GO:0006357 GO:0006351 GO:0002098 | |
| Gene3D | 3.80.30.20 | |
| InterPro | IPR016181 IPR034687 IPR006638 IPR000182 IPR032432 IPR007197 IPR023404 | |
| PANTHER | PTHR11135:SF0 | |
| Pfam | PF00583 PF04055 PF16199 | |
| PIRSF | PIRSF005669 | |
| SFLD | SFLDF00344 | |
| SMART | SM00729 | |
| SUPFAM | SSF55729 | |
| TIGRFAMs | TIGR01211 | |
| PROSITE | PS51186 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0033588 |
Elongator holoenzyme complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0002098 |
tRNA wobble uridine modification |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0033588 |
Elongator holoenzyme complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000123915 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0031604 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000123915 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002926 |
tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000123913 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051536 |
iron-sulfur cluster binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-NUL-4549261 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016746 |
transferase activity, transferring acyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015031 |
protein transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051536 |
iron-sulfur cluster binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Krogan, NJ & Greenblatt, JF (2001) Characterization of a six-subunit holo-elongator complex required for the regulated expression of a group of genes in Saccharomyces cerevisiae. Mol. Cell. Biol. 21 8203-12 PubMed GONUTS page
- ↑ 2.0 2.1 Fichtner, L et al. (2002) Protein interactions within Saccharomyces cerevisiae Elongator, a complex essential for Kluyveromyces lactis zymocicity. Mol. Microbiol. 45 817-26 PubMed GONUTS page
- ↑ 3.0 3.1 Wittschieben, BO et al. (1999) A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Mol. Cell 4 123-8 PubMed GONUTS page
- ↑ Huang, B et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14 2183-94 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
