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XENTR:F6WSJ3

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Species (Taxon ID) Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). (8364)
Gene Name(s) cry2 (ECO:0000313 with Ensembl:ENSXETP00000058497)
Protein Name(s) Cryptochrome circadian clock 2 (ECO:0000313 with Ensembl:ENSXETP00000058497)
External Links
UniProt F6WSJ3
EMBL AAMC01029975
AAMC01029976
STRING 8364.ENSXETP00000058497
PaxDb F6WSJ3
Ensembl ENSXETT00000062900
Xenbase XB-GENE-984563
eggNOG KOG0133
COG0415
GeneTree ENSGT00500000044813
InParanoid F6WSJ3
OMA FYYRLWE
OrthoDB EOG091G07M3
TreeFam TF323191
Proteomes UP000008143
Bgee ENSXETG00000001023
ExpressionAtlas F6WSJ3
GO GO:0005737
GO:0005634
GO:0005667
GO:0045892
GO:0009416
GO:0009266
Gene3D 3.40.50.620
InterPro IPR005101
IPR006050
IPR014729
Pfam PF00875
PF03441
SUPFAM SSF48173
SSF52425
PROSITE PS51645

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0005634

nucleus

PMID:20174658[1]

ECO:0000314

C

Xenopus tropicalis CRY2. Both GFP-CRY1 and GFP-CRY2 localized in the nucleus, while GFP alone localized predominantly in the cytoplasm (Figure 4).

complete
CACAO 12877

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

P

Seeded From UniProt

complete

involved_in

GO:0009416

response to light stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

P

Seeded From UniProt

complete

involved_in

GO:0009266

response to temperature stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q7ZU53
ensembl:ENSDARP00000134736

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Kubo, Y et al. (2010) Cryptochrome genes are highly expressed in the ovary of the African clawed frog, Xenopus tropicalis. PLoS ONE 5 e9273 PubMed GONUTS page