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XENTR:F6WSJ3
Contents
Species (Taxon ID) | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). (8364) | |
Gene Name(s) | cry2 (ECO:0000313 with Ensembl:ENSXETP00000058497) | |
Protein Name(s) | Cryptochrome circadian clock 2 (ECO:0000313 with Ensembl:ENSXETP00000058497) | |
External Links | ||
UniProt | F6WSJ3 | |
EMBL | AAMC01029975 AAMC01029976 | |
STRING | 8364.ENSXETP00000058497 | |
PaxDb | F6WSJ3 | |
Ensembl | ENSXETT00000062900 | |
Xenbase | XB-GENE-984563 | |
eggNOG | KOG0133 COG0415 | |
GeneTree | ENSGT00500000044813 | |
InParanoid | F6WSJ3 | |
OMA | FYYRLWE | |
OrthoDB | EOG091G07M3 | |
TreeFam | TF323191 | |
Proteomes | UP000008143 | |
Bgee | ENSXETG00000001023 | |
ExpressionAtlas | F6WSJ3 | |
GO | GO:0005737 GO:0005634 GO:0005667 GO:0045892 GO:0009416 GO:0009266 | |
Gene3D | 3.40.50.620 | |
InterPro | IPR005101 IPR006050 IPR014729 | |
Pfam | PF00875 PF03441 | |
SUPFAM | SSF48173 SSF52425 | |
PROSITE | PS51645 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005634 |
nucleus |
ECO:0000314 |
C |
Xenopus tropicalis CRY2. Both GFP-CRY1 and GFP-CRY2 localized in the nucleus, while GFP alone localized predominantly in the cytoplasm (Figure 4). |
complete | |||||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009416 |
response to light stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009266 |
response to temperature stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7ZU53 |
C |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Kubo, Y et al. (2010) Cryptochrome genes are highly expressed in the ovary of the African clawed frog, Xenopus tropicalis. PLoS ONE 5 e9273 PubMed GONUTS page