XENLA:SHRM3

Species (Taxon ID)	Xenopus laevis (African clawed frog). (8355)
Gene Name(s)	shroom3 (synonyms: shrm)
Protein Name(s)	Protein Shroom3 Shroom-like protein
External Links
UniProt	Q27IV2
EMBL	DQ398586
RefSeq	NP_001089158.1
UniGene	Xl.12192
PRIDE	Q27IV2
GeneID	734194
KEGG	xla:734194
CTD	57619
Xenbase	XB-GENE-490228
KO	K18625
GO	GO:0005912 GO:0016324 GO:0005737 GO:0005856 GO:0005874 GO:0003779 GO:0045176 GO:0000902 GO:0043482 GO:0007389 GO:0008360
InterPro	IPR014800 IPR014799 IPR027685
PANTHER	PTHR15012
Pfam	PF08688 PF08687
PROSITE	PS51306 PS51307

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0048546	digestive tract morphogenesis	PMID:20332151	ECO:0000314			P		Fig 1 depicts how Shroom3 is is essential for morphogenesis of the developing gut	complete CACAO 5046
	GO:0003382	epithelial cell morphogenesis	PMID:20332151	ECO:0000314			P		Fig 6D depicts Shroom3 expression in the epidermis	complete CACAO 5047
involved_in	GO:0045176	apical protein localization	PMID:16987870	ECO:0000314	direct assay evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0043482	cellular pigment accumulation	PMID:16987870	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
part_of	GO:0016324	apical plasma membrane	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9QXN0	C		Seeded From UniProt	complete
involved_in	GO:0007389	pattern specification process	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9QXN0	P		Seeded From UniProt	complete
part_of	GO:0005912	adherens junction	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9QXN0	C		Seeded From UniProt	complete
part_of	GO:0005856	cytoskeleton	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9QXN0	C		Seeded From UniProt	complete
enables	GO:0003779	actin binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9QXN0	F		Seeded From UniProt	complete
involved_in	GO:0000902	cell morphogenesis	PMID:16987870	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0000902	cell morphogenesis	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030494	P		Seeded From UniProt	complete
involved_in	GO:0001843	neural tube closure	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030494	P		Seeded From UniProt	complete
involved_in	GO:0002064	epithelial cell development	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030494	P		Seeded From UniProt	complete
enables	GO:0003779	actin binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030494	F		Seeded From UniProt	complete
enables	GO:0051015	actin filament binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR014800 InterPro:IPR027685	F		Seeded From UniProt	complete
part_of	GO:0005856	cytoskeleton	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0206 UniProtKB-SubCell:SL-0090	C		Seeded From UniProt	complete
enables	GO:0003779	actin binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0009	F		Seeded From UniProt	complete
part_of	GO:0005874	microtubule	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0493	C		Seeded From UniProt	complete
part_of	GO:0030054	cell junction	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0965	C		Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0217	P		Seeded From UniProt	complete
involved_in	GO:0008360	regulation of cell shape	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0133	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963	C		Seeded From UniProt	complete
part_of	GO:0005912	adherens junction	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0009	C		Seeded From UniProt	complete
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References

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