GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

WOLTR:Q5GSQ0

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Wolbachia sp. subsp. Brugia malayi (strain TRS). (292805)
Gene Name(s) No Information Provided.
Protein Name(s) Transcriptional regulator of HTH-type, xre family (ECO:0000313 with EMBL:AAW70974.1)
External Links
UniProt Q5GSQ0
EMBL AE017321
RefSeq YP_198216.1
ProteinModelPortal Q5GSQ0
STRING 292805.Wbm0386
EnsemblBacteria AAW70974
GeneID 3266564
KEGG wbm:Wbm0386
PATRIC 24032451
eggNOG NOG70180
HOGENOM HOG000063441
OMA KHEVESQ
OrthoDB EOG6WHNTP
BioCyc WEND292805:GH18-438-MONOMER
Proteomes UP000000534
GO GO:0043565
GO:0044212
Gene3D 1.10.260.40
InterPro IPR001387
IPR010982
SMART SM00530
SUPFAM SSF47413
PROSITE PS50943

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0044212

transcription regulatory region DNA binding

PMID:23251587[1]

ECO:0000314

F

Fig.4A "In electrophoretic mobility shift assays (EMSA), FAM-labeled DNA probes derived from the upstream region of ribA, virB8-1, virB3, virB4-2, virB8-2, virB9-2, sodA, wBmxR1 and wBmxR2, and were incubated with (+) or without (–) protein and loaded onto a 6% DNA retardation gel." "(EMSA) showed wBmxR1 binds to regions upstream of the virB9-2, ribA, sodA and wBmxR2 genes (Fig. 4A, C)"

complete
CACAO 8150

enables

GO:0044212

transcription regulatory region DNA binding

PMID:23251587[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010982

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001387

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Li, Z & Carlow, CK (2012) Characterization of transcription factors that regulate the type IV secretion system and riboflavin biosynthesis in Wolbachia of Brugia malayi. PLoS ONE 7 e51597 PubMed GONUTS page