User:Siegersm

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	ARATH:ABAH2	2012-04-15 01:24:37 CDT	GO:0010295 (+)-abscisic acid 8'-hydroxylase activity (F)	PMID:15064374	ECO:0000270 expression pattern evidence used in manual assertion	They demonstrated that the transcript levels of all four CYP707A (abscisic acid 8'-hydroxylase) genes increased in response to ABA (Figs. 3 and ​and 9A) and under various stress conditions (Fig. 9). In other words, ABA activates its own inactivation to PA via transcriptional activation of CYP707A gene expression.	challenge
requireschanges	PSEA8:B7V368	2012-04-15 02:24:21 CDT	GO:0047435 5-guanidino-2-oxopentanoate decarboxylase activity (The gene encodes a 2-ketoarginine decarboxylase. Even though the protein has not been purified yet, the phenotype of a knockout mutant in this gene supports the proposed activity. (Figure 3))	PMID:17416670	IMP: Inferred from Mutant Phenotype		challenge
requireschanges	ECOLI:ASNB	2012-04-15 03:04:43 CDT	GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity (F)	PMID:4895361	ECO:0000270 expression pattern evidence used in manual assertion	Tables VI and VII show that when the gene was activated, it produced asparagine, and when it was inhibited, it stopped the production of Asparagine. Therefore, they concluded that Asparagine synthase was resonsible for the production of Asparagine.	challenge
requireschanges	ORYSJ:NCASE	2012-04-15 03:24:10 CDT	GO:0017040 ceramidase activity (F)	PMID:18547394	ECO:0000270 expression pattern evidence used in manual assertion	In figure 4, it was observed that endogenous levels of phytoceramide with fatty acid chain lengths of C26 and C28 were elevated in Δypc1Δydc1 when expression of OsCDase was induced by growth in galactose. This suggests that OsCDase (ceramidase) may exhibit reverse ceramidase activity and catalyze the formation of phytoceramide with very long chain fatty acids	challenge
acceptable	ECOLI:SDHD	2012-04-15 08:06:19 CDT	GO:0008721 D-serine ammonia-lyase activity (F)	PMID:5327100	ECO:0000314 direct assay evidence used in manual assertion	D-serine ammonia-lyase (DsdA) catalyzes the deamination of D-serine to form pyruvate and ammonia.This is shown in Figure 7 and 8 because it shows the formation of pyruvate from the deamination of D-serine.	challenge

acceptable:1
unacceptable:0
requires_changes:4
flagged:0

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