User:Mtaya1

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	BORPE:BVGA	2012-09-23 13:53:18 CDT	GO:0000156 two-component response regulator activity (F)	PMID:16238621	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 5. shows that the T194M mutant had a significantly reduced rate of phosphorylation by the BvgS sensor kinase.	challenge
requireschanges	BORPE:BVGA	2012-09-23 13:29:59 CDT	GO:0001140 bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (F)	PMID:16238621	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 8. compares the ability of WT and mutant BvgA protein to activate transcription by binding to two promoters, in the presence of RNA Polymerase.	challenge
acceptable	BORPE:BVGA	2012-09-23 13:52:40 CDT	GO:0009405 pathogenesis (P)	PMID:16238621	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2. shows that two BvgA mutants, EMS12 and EMS24, had failed to express the Bvg+ phase phenotype necessary for virulence.	challenge
requireschanges	BORBR:BVGS	2012-09-23 15:00:59 CDT	GO:0009405 pathogenesis (P)	PMID:9194696	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 1. shows several BvgS mutants with reduced virulence (Bvg- or Bvgi).	challenge
acceptable	ECOLI:RUTA	2012-11-18 16:58:05 CST	GO:0052614 uracil oxygenase activity (F)	PMID:20400551	ECO:0000314 direct assay evidence used in manual assertion	Figure 3. shows NMR evidence that RutA cleaves uracil between N-3 and C-4 and incorporates oxygen from molecular oxygen.	challenge
acceptable	ECOLI:RUTA	2012-11-18 16:23:22 CST	GO:0006212 uracil catabolic process (P)	PMID:20400551	ECO:0000314 direct assay evidence used in manual assertion	Figure 2B. shows the disappearance of 14C-labeled uracil at the C-2 and C-6 positions due to action by RutA. The product of RutA is at a different position on the TLC plate compared with the substrate uracil.	challenge
acceptable	ECOLI:RUTA	2012-11-18 16:26:47 CST	GO:0006210 thymine catabolic process (P)	PMID:20400551	ECO:0000314 direct assay evidence used in manual assertion	Figure 2C. shows the disappearance of 14C-labeled thymine at the C-2 and C-6 positions due to action by RutA. The product of RutA is at a different location on the TLC plate compared with the thymine substrate.	challenge
acceptable	ECOLI:RUTB	2012-11-18 17:38:56 CST	GO:0006212 uracil catabolic process (P)	PMID:20400551	ECO:0000314 direct assay evidence used in manual assertion	Figure 2B. shows the disappearance of the RutA product (3-ureidoacrylate) by RutB.	challenge

acceptable:5
unacceptable:0
requires_changes:3
flagged:0

Annotations challenged by Mtaya1

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

0 annotations fixed by Mtaya1