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User:Amandajohnson

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CACAO Spring 2017

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
updatedbyinstructorSTRPY:W0S3I82017-03-24 21:43:56 CDTGO:0045892 negative regulation of transcription, DNA-templated (P)PMID:27349341ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3B and 3C: Streptococcus pyogenes serotype M1(MGAS5005) with mutation in rocA promoter showed increased transcription of nga and sda1 virulence genes

challenge
updatedbyinstructorMYCS2:A0QNG22017-04-07 17:01:02 CDTGO:0044117 growth of symbiont in host (P)PMID:25713147ECO:0000315 mutant phenotype evidence used in manual assertion

In Mycobacterium smegmatis mc2 155, strain mc(2)ΔpknA strain was transformed with pNit vector, pNit-PknA or pNit-PknAK42M. When the inducer was absent the mc(2)ΔpknA:pNit-PknA grew robustly which indicated wild type PknA was capable of functional complementation. Fig 6C shows the growth of M. smegmatis when transformed and showed that PknA is significant for cell growth. When the PknA kinase activity was absent, seen in Fig 6C with pNit vextor and kinase inactive PknA(K42M), there was no growth recovery. Fig 6E and F demonstrated that PknA is necessary for growth. Depletion of PknA in the mc(2)ΔpknA strain resulted in compromised growth, show in Fig 2B.

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Annotations challenged by Amandajohnson

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
updatedbyinstructorAmandajohnson,
Team Moldevort
STRPY:W0S3I8GO:0045892 - negative regulation of DNA-templated transcription (P)PMID:27349341ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2

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