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THAPS:B8BWV6

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Species (Taxon ID) Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). (35128)
Gene Name(s) Helicase_1 (ECO:0000313 with EMBL:EED93598.1)
Protein Name(s) DNA helicase (ECO:0000313 with EMBL:EED93598.1)
External Links
UniProt B8BWV6
EMBL CM000640
RefSeq XP_002288162.1
STRING 35128.JGI261639
EnsemblProtists Thaps261639
GeneID 7442456
KEGG tps:THAPSDRAFT_261639
eggNOG COG1199
HOGENOM HOG000241266
InParanoid B8BWV6
KO K11273
Proteomes UP000001449
GO GO:0005634
GO:0005524
GO:0004003
GO:0003677
InterPro IPR006555
IPR010614
IPR002464
IPR013020
IPR014013
IPR006554
Pfam PF06733
PF13307
SMART SM00488
SM00491
TIGRFAMs TIGR00604
PROSITE PS00690
PS51193

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0034085

establishment of sister chromatid cohesion

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000158371
SGD:S000005929

P

Seeded From UniProt

complete

GO:0033681

ATP-dependent 3'-5' DNA/RNA helicase activity

25579795:25579795

ECO:0000314

F

Unzips DNA

complete
CACAO 10584

involved_in

GO:0032508

DNA duplex unwinding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000158371
UniProtKB:Q96FC9

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000158371
SGD:S000005929
UniProtKB:Q96FC9

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000158371
SGD:S000005929

C

Seeded From UniProt

complete

enables

GO:0004003

ATP-dependent DNA helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11357
MGI:MGI:2139369
PANTHER:PTN002607489
UniProtKB:Q96FC9
UniProtKB:Q9NZ71

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006555

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010614

F

Seeded From UniProt

complete

enables

GO:0004003

ATP-dependent DNA helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006554
InterPro:IPR010614
InterPro:IPR013020

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006555
InterPro:IPR010614
InterPro:IPR014013

F

Seeded From UniProt

complete

involved_in

GO:0006139

nucleobase-containing compound metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006555

P

Seeded From UniProt

complete

enables

GO:0008026

ATP-dependent helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006555

F

Seeded From UniProt

complete

enables

GO:0016818

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006554
InterPro:IPR006555

F

Seeded From UniProt

complete

enables

GO:0004386

helicase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0347

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page