GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
Cacao
| GO:0010468 | regulation of gene expression | PMID:23708137 | IDA: Inferred from Direct Assay | P | ||||
| This annotation made on page: RHILE:Q52856 By: Tgrittner (group Team Hot Cold) on 2013-09-29 10:58:57 CDT. | ||||||||
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| Entry Type | Challenging User,Group | Time/Date | Challenge Reason | Points/Assessment |
|---|---|---|---|---|
| Challenge | Gyang23, Team Despicable Us | 2013-10-06 11:50:40 CDT | Wrong species for the protein, correct protein is Q93CQ5, gene: pssA, species: Rhizobium leguminosarum bv. trifolii | 2 |
| Public Assessment | JimHu | 2013-10-11 19:25:09 CDT | I gave 2 pts to Gyang23 for identifying the UniProt/TrEMBL entry for the more specific biovar of pssA. However, this paper is not suitable for annotation of pssA. If it was, whether this protein entry could be used is a bit unclear, as UniProt assigns that record the NCBI Taxon ID of 384, which is the parent to all R. leguminosarum entries. So, even though the sequence is derived from biovar viciae VF39, it could be argued that this entry could be used as a generic entry for R. leguminosarum. But since it's not a curated entry, the more specific one would be preferable. So my marking of the annotation as unacceptable with the incorrect protein is not because Tgrittner used the wrong entry for pssA. It's because this paper might be usable to annotate a different protein. When we can't fix the annotation on the gene page where it was made, we mark the annotation as unacceptable. | Unacceptable ✗ Protein ✔ Publication |
| Public Assessment | DanielRenfro | 2013-10-06 11:50:40 CDT | This annotation has been flagged because it has been edited since last assessment | Flagged |
| Public Assessment | Paustian | 2013-10-03 19:20:58 CDT | At minimun you annotated to the wrong strain. You have to dig through the refs to verify which strain it is. | Requires Changes ✗ Protein |
